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Name : Sdel_1769 (Sdel_1769) Accession : YP_003304819.1 Strain : Sulfurospirillum deleyianum DSM 6946 Genome accession: NC_013512 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1798474 - 1800207 bp Length : 1734 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: abu:Abu_0696 sugar epimerase/dehydratase DNA sequence : ATGATGACTGTTGATAAACGTATTTTAAACATTTTAGTGATTGTAGTGCTTTCTTGTATGAGCTTTGTGTGGACATTTTG GATCTTTCATCTACCGATTCAGTGGAGTACAATCGGAATCGTTATCGCTGTACGTATAGTGGCTTCTATTGTTATTTTTA AAGATTTTTCACTCTCTTGGTCAAAGGTAACGCAAAAAACATTTCTGATGAAAAGTTTTGTGTATATAGTTGCTTTTTGT GTGTATGTTCCTTTTTATTATGGAAAATTGCGTCTTTCATTTATGCTCTCAGAACTCTTTTTGTATCTCTTTTCGATTAA TTTTTTAATGTATGCTTATTATCTGTTCGTGAACAGAAGTCATGTGAGCAAAGAGAAAAATCTTGTTATCTATGGGGCTG GAAAAGCAGGGTTAAAACTTGCAGAGGAATTTAGAGATAGTCAGTATAAGATACGTTATTTCGTCGATGACAACACACTG CTTCAAAAACGAAGTATTGATGCGATTAGAATCATTTCCAAAGAAAAATTAAAACAAAAAATGCAATCGAGCACATATGA TTTGTTGTTGATTGCGATACCCTCAGCACCAACAAAAAAAATCAATGCACTTTACGAAGAATTCAAGCCTTTTTTTAGTG AAATTAAAATTTTACCGACATTGGAGAATATTCTCTCCGATACAGTTTTATCGAATCAACTCAAAAATATTACCGTTGAA GATTTATTAGCTAGGCATCCTCAAGATTTGGATAAGGTCAAAATTGGGGAATTTATCCATGATAAAGTGGTCTTGATAAC AGGTGCGGGTGGAAGTATTGGTAGTGAAATTGTGCGACAGTGTTTAAAATACAATGCAAAAAAGCTGATTTTAGTGGATC ATAGTGAGTTCAATTTGTATCAAATCATAGAAGAGCTACACAGTGATAAACTTGTACCCATTATGCAAAGCGTTTTAAAC GAGTCATTGTTGGAAGATGTTTTTCATCGCTATCGCCTAGATATTGTGGTACATGCCGCTGCCTATAAACATGTACCACT GGTGGAGGCAAATCCAAAAGAGGGCATTTTAAATAATATTTTGGGTACAAAAATTTGCATTGATTTGGCGATTAAATATG AAGTAGGTAAATTTATTTTAATCTCAACCGATAAAGCAGTACGTCCCACCAATGTGATGGGTGCGACAAAACGTGTGTGT GAGCTGTATGCTCAAAATGTGGATGCGGGTAACACACACATTGTTGCAGTACGCTTTGGAAATGTTTTGGGTAGTAGTGG CTCTGTTATCCCTAAATTCAAAGCGCAAATTGAAAAAGGAGGTCCCATTACGGTTACGCATCCTGACATTACACGCTATT TTATGTTAATTCCTGAAGCGTGTGAGTTGGTACTTCAAACAGGAGCGATTGGGAGGAGTGGGGAGCTGTTTATTTTGGAT ATGGGTGAACCTGTAAAAATCGTCGATTTAGCGCAAAAAATGATAGAACTCTCAGGAAAAAATGATATTACTATCGAATT TACAGGACTGCGACCTGGTGAAAAGCTGTATGAAGAGCTTTTGATTAATGAGAGTGATAAGAAGACTGAGTATACTTCTA TATTGGTTGCACATCGAAGTATGTATCCGATTGAAAAACTTGAACACGAGATAGCAACACTTTTTACATGTAAAGATATT TTGGCACAGCTTAAACATATTGTGCCTGAGTTTAATCATCAAAAAAACATATAA Protein sequence : MMTVDKRILNILVIVVLSCMSFVWTFWIFHLPIQWSTIGIVIAVRIVASIVIFKDFSLSWSKVTQKTFLMKSFVYIVAFC VYVPFYYGKLRLSFMLSELFLYLFSINFLMYAYYLFVNRSHVSKEKNLVIYGAGKAGLKLAEEFRDSQYKIRYFVDDNTL LQKRSIDAIRIISKEKLKQKMQSSTYDLLLIAIPSAPTKKINALYEEFKPFFSEIKILPTLENILSDTVLSNQLKNITVE DLLARHPQDLDKVKIGEFIHDKVVLITGAGGSIGSEIVRQCLKYNAKKLILVDHSEFNLYQIIEELHSDKLVPIMQSVLN ESLLEDVFHRYRLDIVVHAAAYKHVPLVEANPKEGILNNILGTKICIDLAIKYEVGKFILISTDKAVRPTNVMGATKRVC ELYAQNVDAGNTHIVAVRFGNVLGSSGSVIPKFKAQIEKGGPITVTHPDITRYFMLIPEACELVLQTGAIGRSGELFILD MGEPVKIVDLAQKMIELSGKNDITIEFTGLRPGEKLYEELLINESDKKTEYTSILVAHRSMYPIEKLEHEIATLFTCKDI LAQLKHIVPEFNHQKNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-72 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sdel_1769 | YP_003304819.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 5e-73 | 43 |
