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Name : Sdel_1756 (Sdel_1756) Accession : YP_003304806.1 Strain : Sulfurospirillum deleyianum DSM 6946 Genome accession: NC_013512 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1783171 - 1784415 bp Length : 1245 bp Strand : + Note : KEGG: nis:NIS_1379 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTAGATATTAAACTGATTCAAAATGATTTTGATACTGTTGCCACAGCGCTCAGAAAGAAAAAAGTAGATGAGAGCCT TTTGGAAGAACTTCGTGCTATTTCATTGGAACTTAAAAGTGCACGTCTTGTTTTAGAGCCACTCCAAGCGGAACAAAATG CTAAAAGCAAACTCTTTGGGGTTTATGCCAAAGAAGGCAAAGATGTGGGAGCGCTTAAAGCAGAACTCTCTTTAAACAAA GAAAAAATCGCTGAGAAAACGGAGGTGGTTCGTGCCTTAGAAGAGAAGCTTGAAGCACTAGCGACTATTATTCCAAATAT GCCCTCTTCTCTTGTTCCTGAAGGTGAAGATGAAAATGACAACGTGGAACTGAAACGTGTGCTTGAGCCTAAAACATTTT CCTTTACTCCTAAAGAGCATTGGGATATCGACAGCAAACAAAACTGGATTGATTTTGAGAGAGGTGTAAAACTTGCCAAA AGCCGTTTTAGTGTTTTAAAAAATGACGCTGCCAGATTAGAGCGAGCGCTCATTAACTATATGCTTGATTTTAACCGAAG CCGTGGTTTTCATGAGGTAGCCGTTCCTTACATTGTCAACCGTGAAACACTGATGGGAACAGGACAACTCCCTAAATTTG AAGATGACCTCTTTAAAATTGATGGCGAAGAGCTCTTTTTGATTCCTACTGCTGAAGTGCCTGTCACCAACCTTTTTAGA GATGAAATTCTAAGCAAAGAAGAACTCCCTCTTAAAATGACCGCCTATTCTGCATGTTTTCGAAAAGAAGCAGGCAGTGC GGGGAAAGATACCCGTGGCATGATTCGCCAGCACCAGTTTGATAAAGTAGAATTGGTTTCAATTACCACACCAGAACAGA GCGAAACGGTTTTTGAAGAGATGCTTTCATGTGCTTCTGATTTACTTAGCTCCTTAGGACTCCCTCACCGCCACTTAATG CTTTGTGGTGGAGATTTGGGCTTTAGTGCTGCAAAAACGGTGGATTTGGAAGTCTGGCTTCCAGGGCAAAACCGTTACCG TGAAATTAGTTCCGTATCTAATACCTTCGACTTTCAAGCCAGACGAGCTAAAATTCGCTTTAAAGATGAGGGTAAAAACC GCTTAGTACACACGCTCAATGGCTCTTCTTTAGCCGTGGGTCGCACACTCATCGCCATTATGGAAAATTACCAACAAGAA GATGGCAGTGTTGCCATTCCTGAAGTCTTGAAAAAGTACATGTAA Protein sequence : MLDIKLIQNDFDTVATALRKKKVDESLLEELRAISLELKSARLVLEPLQAEQNAKSKLFGVYAKEGKDVGALKAELSLNK EKIAEKTEVVRALEEKLEALATIIPNMPSSLVPEGEDENDNVELKRVLEPKTFSFTPKEHWDIDSKQNWIDFERGVKLAK SRFSVLKNDAARLERALINYMLDFNRSRGFHEVAVPYIVNRETLMGTGQLPKFEDDLFKIDGEELFLIPTAEVPVTNLFR DEILSKEELPLKMTAYSACFRKEAGSAGKDTRGMIRQHQFDKVELVSITTPEQSETVFEEMLSCASDLLSSLGLPHRHLM LCGGDLGFSAAKTVDLEVWLPGQNRYREISSVSNTFDFQARRAKIRFKDEGKNRLVHTLNGSSLAVGRTLIAIMENYQQE DGSVAIPEVLKKYM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-88 | 49 |
