Gene Information

Name : Sdel_1725 (Sdel_1725)
Accession : YP_003304775.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1751851 - 1752561 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mei:Msip34_1220 ABC transporter

DNA sequence :
ATGGATGAGGTCATTAAAATCGTCAATGTGACGAAAAATTATGTGACAGAAGCGGGAGAAGTTTCTGTTTTAAAAGGGAT
TAATAGTCTTGTTTATAAAGGTGAATTTGTTGCGATTATGGGACCATCAGGTTCAGGAAAATCAACATTTATGAATATTT
TGGGATGTTTGGATAAAGCCAGTAGCGGTGAGTATTATCTCAGTGGAAAAGAGACCAGTCGTTTGAGTAAAAATGAGTTG
GCAGAGCTGCGTAATCGTATTATTGGGTTTGTGTTTCAAGGGTTTAATTTGATTCCACGACAAACACTTTTAGATAATGT
TGCCTTGCCTTTAGTGTATGCAGGGGTGGCAACAGATGAACGTAAAAAACGTGCCAAAGAGGTGCTTAAAAGTGTGGGTT
TGGGGAATTTTGAACACTACCTTCCCAATCAAATTTCAGGGGGACAGCAACAGCGTGTTGCGATAGCTAGAGCTTTGGTC
AATCGCCCTCAATTAATTTTAGCCGATGAACCCACTGGAAATTTAGATACCAAAACCAGTCAAGAAATTATGCAGTTATT
TTGCGATTTGAATGAGAAAGAGGGGATTACAATCGTCCTTGTTACCCATGAATCTAATATTGCAGCGTATGCGAAACGGT
TAATTACAGTGGTGGATGGAAAAATTCAACACGATGGAACAACCGCAGTACTGAAGGATAAACGTTTATGA

Protein sequence :
MDEVIKIVNVTKNYVTEAGEVSVLKGINSLVYKGEFVAIMGPSGSGKSTFMNILGCLDKASSGEYYLSGKETSRLSKNEL
AELRNRIIGFVFQGFNLIPRQTLLDNVALPLVYAGVATDERKKRAKEVLKSVGLGNFEHYLPNQISGGQQQRVAIARALV
NRPQLILADEPTGNLDTKTSQEIMQLFCDLNEKEGITIVLVTHESNIAAYAKRLITVVDGKIQHDGTTAVLKDKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_1725 YP_003304775.1 ABC transporter NC_012469.1.7686878. Protein 2e-56 58
Sdel_1725 YP_003304775.1 ABC transporter CP001581.1.gene798.p Protein 2e-39 46
Sdel_1725 YP_003304775.1 ABC transporter CP001581.1.gene598.p Protein 5e-39 44
Sdel_1725 YP_003304775.1 ABC transporter NC_008702.1.4606598. Protein 3e-41 44