Gene Information

Name : Sdel_1661 (Sdel_1661)
Accession : YP_003304711.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1673176 - 1674606 bp
Length : 1431 bp
Strand : +
Note : TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cff:CFF8240_1054 glutamine synthetase

DNA sequence : 
ATGGGTAAGTTCGTGAACAGTGTTGAAGAATTTTTCAAATATTGTACCGATAATGAGGTTGAGTTTGTTGATTTTCGTTT
TACCGATATGAAAGGAACATGGCATCATGTTACCTACACCATTGAAGCGGTCAATCCAGACTCTTTCCACAGCGGTATCC
CTTTTGATGGCTCATCCATCGAACATTGGCAACCGATTAACAAATCTGACATGCTCCTCAAACCTGAAGCAGAAACAGCG
TTCCTAGACCCTTTTACAGCAGATCCTACCATTGTTGTTTTTTGTGATGTCTATGACATTTACAAAGGTGAATTGTATGA
AAAATGTCCACGTAGTATCGCCAAAAAAACATTACAACATTTAGCAACAACGGGCTTAGGTGATGTAGCTTACTTTGGAC
CTGAAAATGAATTTTTTGTGTTTGACGATGTCAAAATCAGAGATGACATCAACTGTTCTTACTATGAAGTGGATTCTGAA
GAGGGTGGCTGGAACAGTGCGAAAGAGTACAAAGATGGTTACAACACAGGTCACCGCCCAGGAACAAAGGGAGGCTATTT
CCCAGTGCCACCTATTGACTCTATGGTCGATTTACGTGCAGAAATGGTACAGGTGTTAAAACAAATTGGTCTTGAGGTTT
TCGTGGTTCACCATGAAGTCGCACAAGGTCAAGGCGAAATCGGTGTGAAGTTTGGAACTCTTATCGAAGCAGCAGATAAT
GTACAAAAATACAAATATGTGGTTAAAATGGTTGCCCACCTCAACGGCAAAACAGCAACCTTTATGCCAAAACCACTTTA
CGGGGACAATGGTAGCGGTATGCACGTTCACCAATCTATCTGGAAAGATGGCAAAAACTTGTTTTACAAAGCAGGTGAAT
ACGCAAACCTCAGCGATATGGCACGTTGGTACATCGGTGGTATTTTAAAACATGCACGTAGTGTTGCGGCATTTACAAAC
CCATCAACCAACTCTTATAAGCGTTTAATTCCAGGATTTGAAGCACCTTCCATTCTAACGTACTCTATGCAAAATCGCTC
AGCTTCATGTCGTATTCCTTACGGTGCAGGTGAAAAATCAGTCCGTGTGGAGATGCGCTTCCCAGACTCAACAGCGTGCC
CATACCTTGCCTTCTCAGCCATGCTTTTAGCGGGTATTGATGGTATCAACACCAAAACAGAGCCTATTGGTCCAATGGAT
GAGGATTTATTTGAATTGACACTTGATGAAATCAGAGAGAAAGGGATTAACCAAATGCCTCATACACTCAGAGGTTCTCT
TGAAGCTTTGATTCGTGACAATGAGTATCTTAACCCTGTGATGTCTAAAGAGTTTATCGATACCTACCAACACTACAAAT
TTGAAACACAAGTCTGGCCAGATGAGGCAAGACCTACGGCATTTGAATTTAAAACCATGTTCTCATGCTAA

Protein sequence : 
MGKFVNSVEEFFKYCTDNEVEFVDFRFTDMKGTWHHVTYTIEAVNPDSFHSGIPFDGSSIEHWQPINKSDMLLKPEAETA
FLDPFTADPTIVVFCDVYDIYKGELYEKCPRSIAKKTLQHLATTGLGDVAYFGPENEFFVFDDVKIRDDINCSYYEVDSE
EGGWNSAKEYKDGYNTGHRPGTKGGYFPVPPIDSMVDLRAEMVQVLKQIGLEVFVVHHEVAQGQGEIGVKFGTLIEAADN
VQKYKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHVHQSIWKDGKNLFYKAGEYANLSDMARWYIGGILKHARSVAAFTN
PSTNSYKRLIPGFEAPSILTYSMQNRSASCRIPYGAGEKSVRVEMRFPDSTACPYLAFSAMLLAGIDGINTKTEPIGPMD
EDLFELTLDEIREKGINQMPHTLRGSLEALIRDNEYLNPVMSKEFIDTYQHYKFETQVWPDEARPTAFEFKTMFSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-156 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_1661 YP_003304711.1 glutamine synthetase VFG1399 Protein 1e-93 49