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Name : Tcur_3970 (Tcur_3970) Accession : YP_003301537.1 Strain : Thermomonospora curvata DSM 43183 Genome accession: NC_013510 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 4525141 - 4528482 bp Length : 3342 bp Strand : + Note : KEGG: afr:AFE_0480 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); protein of unknown function DUF472; protein of unknown function DUF471; protein of unknown function DUF470; nucleic acid binding OB-fold DNA sequence : ATGACGGCTGACAGCAAGGTCCCGGCCGGCACCGCCGGCCACGGGCTGCGTGACGGCTGGCAGCGCCTCACCAAAGCGGC CCCCGACGTCTTCTTCTGGTACACCCGCCTGTCGGGCGTGCTGTCGATCCTGGCGTTCGTCTCCTCGGACCTGATCCAGC GGCTGGGCGGCATCTGGGCGCTGCAGTGGATCTACTACCTGGGCTTCACCGCCAGCCTGCCGTACGGGGTGCTGCTGATC CTGCTGTCGATGGGCGTGCGGCGGCGCAAGAAGGCCGCCTGGCGGATCCTGATGCTGCTGTTCGGCGGCTACTTCGCCAT CGCGCTGCTGGTGGTCGGCTCCCTGGCGGCCGATCCGGACCGGTCGGTGGCGGCCGGCGAGCTGGTCACGGTGGTCGCCT ACGCGGCGGTGCTGACGCTGCTGGCGGCGGCGCGTCCGGAGTTCAACGCGCTGCCCGACCGGGCCAACCGGCGGCTGGCG CTGGCGGTGTTCTCCGGGCTGCTGGTGGTCAGCGGGCTGCTGGGCACCGGGCTGGTCACGTTGATGAACCGCGACCCCGA CGGGCGCTTCCTGACCGACGCGCTGTATGTGGTGCTGCAGACCGTCGGCGGGCCGGGGGTGACCGGCGAGCCCATCAACG TGGACGTGCCGACCCGGGTCAACCTGCTGCTGGGGGTGCTGGGCACCGGCCTGCTGATCATCACGTTCTGGGCGCTGTTC CGCCCGGGCCATCGCGACGCGGTGCTCAGCCCCGCCGAGGAGCTGACCGCCCGCCGGCTGCTGGCCGAGTACGGCGAGCA GGACTCGTTGGGCTACTTCGCGCTGCGCCGCGACAAGAACGTCATCGTCGCCCCCAACGGCAAGGCCGCCATCTCCTACC GCGTCGAGGGGGCGGTCTCGCTGGCCAGCGGCGACCCGCTGGGCGACCCGGAGTCCTGGGACCAGGCCATCGAGCTGTGG CTGGCCGAGTGCCGCGCGCACGCCTGGATCCCCGGGGTGGTCAGCGCCGGGGAGCGCGCCGCGCACGTCTACCGGCGGCA CGGCTTCGACGCGCTGGAGCTGGGCGATGAGGCCATCTTGGAGCTGACCGACTTCACCTTGGACGGCCGGGAGATGCGCC AGGTCCGCCAGGCGGTGCGGCGGGTGGAGCGGGCCGGCTACACGGTGCGGATCCGCCGGCACGCCCAGATCCCGCCCGAG GAGATGGCGCAGCTGATCGCCAGCGCCGACCGGTGGCGGGAGGGGGCCATCGAGCGCGGGTTCTCCATGGCGCTGGGCCG CCTCGGCGACCCCACCGACGGCCGCTGCCTGATGGTCGAGGCGTTCGACGCCCAGGGCCGGCTGCGCGGCCTGCTGAGCT TCGTGCCCTGGGGCCGGCACGGGCTGTCGCTGGACCTGATGCGCCGCGACCGCACCGCCGAGAACGGCCTGAACGAGTTC ATGATCGCCAAGGTGGCGGAGCAGGCGGCGCTGATCGGCGCGCAGAAGATGTCGCTGAACTTCGCGATGCTGCGCTCGGC GTTCGAGCGCGGCTCCCAGCTGGGCGCCGGGCCGGTGGCCCGGGCCTGGCACCGGTTCCTGTCGCTGGCCTCCAAGTTCT GGCAGCTGGAGTCGCTGTACCTGGCCAACGCCAAGTACAACCCCACCTGGGCGCCCCGGTTCGTCTGCTACCAGCAGTCC CGGGACCTGGTGCGGCTGGGGCTGGCGTTCGCCCGGGCCGAGGGGTTCCTGCCCACCCTGAACCGGCCCCGCCTGGAGCG CGCCGCCCGGCTCACCCCCTCCCCCGAGCTGGTGCGGCGGATCAAGCGGATCGAGGAGGAGGCCGAGGCCGCCCGCGCCC CGCAGCGGCGGCTGTCGGAGCAGGAGCGGGTGCGGCACGCCAAGCTGGAGCACATCCGCGCCGCCGGGATGGACCCCTAC CCGCTGGGGTTCGACCGCACCGATTTCGCCGCCGACATCCGCGCCCGCTTCGGCGGCCTGCCCCCCGACGCCCGCACCGG CGAGCAGGTGCGCATCGCCGGGCGGGTGATGCTGGCCCGTGAGCACGGCCGGCTGGTGTTCGTCACGCTGCGCGATGAGA CCGGCGACATCCAGGTGATGCTGTCGGCCGACCGGCTGGAGCCCGACGGGCCGGACGGCGCGCCGGTCCCCGGCTCGCTG CGGGCCTGGAAGCGCCTGATCGACCTGGGCGACCAGGTCGGCATCGCGGGCGAGGTGGTCACCTCCAAGCGCGGGGAGCT GTCGGTGCTGGCCACGAGCTGGACGCTGACGGCCAAATGCCTGCGCCCGCTGCCCAACAAGCGCAGCGGCCTGGCCGACC CGGAGGCGCGGGTGCGGCAGCGGTATGTGGAGTTCATCGTCAACGACGAGGCCCGCCGGATGCTGCGGATGCGCGGCGAT GCGGTGGCGGCGATCCGCGACCGGCTGCGCGAGCTGGGCTACCTGGAGGTGGAGACGCCCATGCTGCAGCCCATCCACGG CGGCGCCGCGGCCCGGCCGTTCACCACCCGCATCAACGCCTACAACATGCAGCTGTACCTGCGGATCGCCCCCGAGCTGT ACCTCAAGCGGCTGCTGGTCGGCGGGGTCGGCAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAGGGCGTCTCCCCC AAGCACAATCCCGAGTTCACGATGCTGGAGGCCTACGAGCCCTACGGCGACTACGACACCATGGCCGCCCTGACCCGGGA TCTGGTGCTGCGGGCCGCCCGCGCGGCGCTGGGCACCACGGTGGTGGTGCGCGACGGCGCCGAATGCGACCTGGCCGAGC CGTGGCGCCAGATCACCGTGTACGAGTCGGTCTCCCGGGCCCTCGGCGAGGAGATCACCCCCGACACCCCCGCGTCCCTG GTCGGCAAGTACGCCGAGCGGGCGGGCCTGGAGTTCGACGCCGGCTGGGGGCAGGGCAAGCTGGTGCAGGAGCTGTTCGA GGCGCTGGTGGAGCCCGGGATCAAGGCCCCCACCTTCGTCCGCGACTACCCCGCCGAGACCTCCCCGCTGACCCGCCCGC ACCGCGCCGACCCCCGGCTGGCCGAAAAGTGGGACCTGATCGTCTTCGGGCTGGAGCTGGGCACCGCCTACAGCGAGCTG ATCGACCCGATCCTGCAGCGGCAGCGGCTCACCGAGCAGTCGCTGCTGGCCGCCGGGGGCGACCCGGAGGCGATGGAGCT GGATGAGGACTTCCTGCGCGCCCTGGAGTACGCCATGCCGCCGGCCGGCGGGATGGGCATGGGCATCGACCGGCTGCTGA TCACCCTGACCGGCAAGAGCATCCGCGAGACCATCCCCTTCCCGCTGGCGCGTCCCCGCTGA Protein sequence : MTADSKVPAGTAGHGLRDGWQRLTKAAPDVFFWYTRLSGVLSILAFVSSDLIQRLGGIWALQWIYYLGFTASLPYGVLLI LLSMGVRRRKKAAWRILMLLFGGYFAIALLVVGSLAADPDRSVAAGELVTVVAYAAVLTLLAAARPEFNALPDRANRRLA LAVFSGLLVVSGLLGTGLVTLMNRDPDGRFLTDALYVVLQTVGGPGVTGEPINVDVPTRVNLLLGVLGTGLLIITFWALF RPGHRDAVLSPAEELTARRLLAEYGEQDSLGYFALRRDKNVIVAPNGKAAISYRVEGAVSLASGDPLGDPESWDQAIELW LAECRAHAWIPGVVSAGERAAHVYRRHGFDALELGDEAILELTDFTLDGREMRQVRQAVRRVERAGYTVRIRRHAQIPPE EMAQLIASADRWREGAIERGFSMALGRLGDPTDGRCLMVEAFDAQGRLRGLLSFVPWGRHGLSLDLMRRDRTAENGLNEF MIAKVAEQAALIGAQKMSLNFAMLRSAFERGSQLGAGPVARAWHRFLSLASKFWQLESLYLANAKYNPTWAPRFVCYQQS RDLVRLGLAFARAEGFLPTLNRPRLERAARLTPSPELVRRIKRIEEEAEAARAPQRRLSEQERVRHAKLEHIRAAGMDPY PLGFDRTDFAADIRARFGGLPPDARTGEQVRIAGRVMLAREHGRLVFVTLRDETGDIQVMLSADRLEPDGPDGAPVPGSL RAWKRLIDLGDQVGIAGEVVTSKRGELSVLATSWTLTAKCLRPLPNKRSGLADPEARVRQRYVEFIVNDEARRMLRMRGD AVAAIRDRLRELGYLEVETPMLQPIHGGAAARPFTTRINAYNMQLYLRIAPELYLKRLLVGGVGKVFEINRNFRNEGVSP KHNPEFTMLEAYEPYGDYDTMAALTRDLVLRAARAALGTTVVVRDGAECDLAEPWRQITVYESVSRALGEEITPDTPASL VGKYAERAGLEFDAGWGQGKLVQELFEALVEPGIKAPTFVRDYPAETSPLTRPHRADPRLAEKWDLIVFGLELGTAYSEL IDPILQRQRLTEQSLLAAGGDPEAMELDEDFLRALEYAMPPAGGMGMGIDRLLITLTGKSIRETIPFPLARPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 8e-156 | 44 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-156 | 44 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-156 | 44 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-156 | 44 |
