Gene Information

Name : Tcur_0365 (Tcur_0365)
Accession : YP_003298005.1
Strain : Thermomonospora curvata DSM 43183
Genome accession: NC_013510
Putative virulence/resistance : Virulence
Product : AMP-dependent synthetase and ligase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : -
Position : 400775 - 402349 bp
Length : 1575 bp
Strand : +
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce3880 (2,3-dihydroxybenzoyl)adenylate synthase

DNA sequence :
ATGGAAGGCTTCACCCCCTGGCCGGAGGAGCTGGCCGCGCGCTACATCGCCGAGGGCTACTGGGGCGACCACGTACTGGG
CGAGGTACCCCAAGGCGACCCCGACCGCGTCGCACTGGTCGCCGGAGATGAGCGCCTGACCTACGCCGAGCTGGAGCGGC
GCATCGACCGCACCGCCGCCGGCCTGCACCGCCTGGGCATCCGGCGCGGCGACCGGGTGGTGCTCCAGCTGCCCAACACC
GCGTCCTTCGTCATCGTCTTCCTGGCGCTGATGCGCCTGGGAGCGCCCCCGGTGCTGGCCCTGCCCGCCCACCGGCACAG
CGAGATCGGCTACCTGTGCGAGCTGGCCGAGGCCAAGGCCTACATCATCCCCGACCGGCACGCCGGCTACGACTACCGCG
AGCTGGCCCGCTCCCTCGGCGGCGTGGAGCACGTCATCGTCGACGGCGAGGCCGCCGAGTTCACCCCCCTGGCCGAGCTG
GACGCCGACCCCATCCCGTTGGAGCGGCCCGACCCGGCCGACGTGGGCCTGTTCCTGCTGTCGGGCGGCACCACCGGCCT
GCCCAAACTGATCCCCCGGACCCACCGCGACTACGTCTACAACCTGACCGCCAGCGCCGAGGTCTGCGGCTTCACCTCCG
GCACCGTCTACCTGGTGGTGCTGCCGGCCGCCCACAACTTCGCCCTGGCCTGCCCCGGCCTGCTGGGCACCCTGTCGGTC
GGCGGCACGGTCGTGCTGGCCCCCTCCGGCTCCCCGGACGCGGCGTTCCCGCTGATCGAACGGGAACGCGCCACCGTCTG
CGCGGTCGTCCCCCCGATCGCGCTGCTGTGGCTGGACGCGGCCACCTGGTCGGAGGAGGACCTGTCGTCCCTGCAGCTGC
TGCAGGTGGGCGGCGCCAAACTGGCCACGGAACCGGCCTCCAAGATCCCCGGGGTCCTCGGCTGCAAGCTGCAGCAGGTC
TTCGGCATGGCCGAGGGCCTGCTCAACTACACCCGCCTGGACGACCCGCCCGAGCTGATCGAGACCACCCAGGGCCGCCC
GCTGTCCCCGGCCGACGAGATCCGCGTGGTGGACCCCGACACCGGCGAGGACGTCCCCGAAGGCGAGGTCGGCGAGCTGC
TCACCCGCGGCCCCTACACCCTGCGCGGCTACTACAAGGCCCCCGAGCACAACGCCCGCTCCTTCACCGCCGACGGCTTC
TACCGCACCGGCGACCTGGTGCGGCGGCTGCCGTCCGGCCACCTGGTGGTGGAGGGGCGCCACAAGGACCAGATCAACCG
GGGCGGCGAGAAGATCGCCGCCGAGGAGCTGGAAGGCCACCTGATCGCCCACCCGGCCGTCCACGACGCGGCGGTCGTCG
GCGTGCCCGACCCGGTCATGGGCGAACGCACCTGCGCGTTCCTCGTCGCCCGCGGCACCCCGCCCACCCTGCGGGAGGTG
AAGGAGTTCCTGCGCGACCGCGGAGTGGCCGACTACAAGTGGCCCGACCGCATCGAAGTGGTCGACGCCTTCCCCCGCAC
CCCCGTCGGCAAGATCAGCAAGAAGGCGCTCCTCGCCATGCTGGACAAGGCCTAG

Protein sequence :
MEGFTPWPEELAARYIAEGYWGDHVLGEVPQGDPDRVALVAGDERLTYAELERRIDRTAAGLHRLGIRRGDRVVLQLPNT
ASFVIVFLALMRLGAPPVLALPAHRHSEIGYLCELAEAKAYIIPDRHAGYDYRELARSLGGVEHVIVDGEAAEFTPLAEL
DADPIPLERPDPADVGLFLLSGGTTGLPKLIPRTHRDYVYNLTASAEVCGFTSGTVYLVVLPAAHNFALACPGLLGTLSV
GGTVVLAPSGSPDAAFPLIERERATVCAVVPPIALLWLDAATWSEEDLSSLQLLQVGGAKLATEPASKIPGVLGCKLQQV
FGMAEGLLNYTRLDDPPELIETTQGRPLSPADEIRVVDPDTGEDVPEGEVGELLTRGPYTLRGYYKAPEHNARSFTADGF
YRTGDLVRRLPSGHLVVEGRHKDQINRGGEKIAAEELEGHLIAHPAVHDAAVVGVPDPVMGERTCAFLVARGTPPTLREV
KEFLRDRGVADYKWPDRIEVVDAFPRTPVGKISKKALLAMLDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 4e-103 53
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 5e-103 53
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-103 53
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 5e-103 53
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-103 53
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-103 53
ybtE CAA21394.1 - Virulence HPI Protein 5e-103 53
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 4e-102 52
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 3e-102 52
irp2E YP_005134497.1 siderophore biosynthetic protein Virulence Not named Protein 5e-71 44
irp2E YP_005163485.1 siderophore biosynthetic protein Virulence Not named Protein 6e-71 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcur_0365 YP_003298005.1 AMP-dependent synthetase and ligase VFG0168 Protein 2e-121 57
Tcur_0365 YP_003298005.1 AMP-dependent synthetase and ligase VFG1817 Protein 5e-109 52
Tcur_0365 YP_003298005.1 AMP-dependent synthetase and ligase VFG0932 Protein 5e-99 48