Gene Information

Name : Tcur_3550 (Tcur_3550)
Accession : YP_003301123.1
Strain : Thermomonospora curvata DSM 43183
Genome accession: NC_013510
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4076275 - 4076991 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_3059 ABC transporter-related protein

DNA sequence : 
ATGAGCGTGCTCGTCATGCGCGAGGTCTCGCGCGACCACGGCGCCGGGCCGAACCTGGTGCACGCCCTGCGCGGCGTCAG
CCTCCATGTGGAGGCCGGGGAGTTCGTGGCGGTGATGGGGCCGTCCGGCTCCGGCAAGTCCACCCTGCTCAACCTCGCCG
GCGGGCTCGACCGGCCCACCGGCGGGCGGGTGCTGGTGGAAGGCGTCGATCTGAGCACCCTGGGCAAGGCGGAGCTGGCG
CGGCTGCGGCGCCGCAGCATCGGCTACGTCTTCCAGGACCTCAACCTCATCCCCGCGCTGACCGCGGCGGAGAACGTGAT
GCTGCCCCGCGAGCTGGACGGCGTGCGCACCGCCCAGGCCCGGCGCGAGGCGCTGCGGGCATTGGAGGAGGTCGGCGTCC
CCGAGCTGGCCGACCGGTTCCCCGACGAGATGTCCGGCGGGCAGCAGCAGCGCGTGGCGATCGCCCGGGCACTGGTGGGG
GAGCGGCGGCTGATGCTCGCCGACGAGCCGACCGGGGCGCTGGACACCGCCACCGGCGAGGAGGTCATGCGCCTGCTGCG
GGCCCGCTGCGACGCCGGGGCCGCCTGCCTGATGGTCACCCACGAATCCCGGCACGCCGCCTGGGCCGACCGGGTGGTGT
TCCTGCGCGACGGCGTGATCGTCGACGCCACCGGGAGCCCCGCCGGCCCCGAGAGCCTGCTGGAGGGCGCCCGGTGA

Protein sequence : 
MSVLVMREVSRDHGAGPNLVHALRGVSLHVEAGEFVAVMGPSGSGKSTLLNLAGGLDRPTGGRVLVEGVDLSTLGKAELA
RLRRRSIGYVFQDLNLIPALTAAENVMLPRELDGVRTAQARREALRALEEVGVPELADRFPDEMSGGQQQRVAIARALVG
ERRLMLADEPTGALDTATGEEVMRLLRARCDAGAACLMVTHESRHAAWADRVVFLRDGVIVDATGSPAGPESLLEGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcur_3550 YP_003301123.1 ABC transporter NC_008702.1.4606598. Protein 5e-35 50
Tcur_3550 YP_003301123.1 ABC transporter CP001581.1.gene598.p Protein 4e-41 47
Tcur_3550 YP_003301123.1 ABC transporter NC_012469.1.7686878. Protein 2e-41 46
Tcur_3550 YP_003301123.1 ABC transporter CP001581.1.gene798.p Protein 2e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcur_3550 YP_003301123.1 ABC transporter VFG2059 Protein 2e-16 42