Gene Information

Name : Tcur_0347 (Tcur_0347)
Accession : YP_003297987.1
Strain : Thermomonospora curvata DSM 43183
Genome accession: NC_013510
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 378542 - 379231 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: dar:Daro_1671 ABC transporter related

DNA sequence : 
ATGACCGCCACCACCGCCACCACGACCGGGCTGGCCCTGGAGCAGGTCACCTTGGAGTACGGGACGGGCGACACGCTGGT
GACCGCGCTGGATGAGGTCACCTTGACCGTGGAGCCCGGGGAGTTCGTCGCGGTCGTCGGCCCGTCGGGGTCGGGCAAGT
CCAGCCTGCTGGCCGTGGCGGGCGCGCTGATCCACCCCACCCGGGGCCAGGTGCGCATCGCCGATGTGACCGTCTCCGGC
GCCAAGGCCGCCGAGCTGGCGAGGCTGCGCCGCACCCGGATCGGCTACGTCTTCCAAAGCGGCAACCTGCTGGCCTCGCT
GACCGCCCGCGACCAGCTGCTGCTGGTGCCGCACCTGTCGGGGCGGATCACCGCCGAGGACCGGGCCCGCGCCGACGAGC
TGCTGGAGGCGGTCGGGCTGACCGCCAAGGCCGACCGCCGCCCGCACGAGCTGTCCGGCGGCGAGCGGCAGCGGGTCGGG
CTGGCCCGCGCGCTGATGAACCGGCCGGCGGTGCTGCTGGCCGACGAGCCCACCGCGGCGCTGGACCGCCGCCGGGCCCG
TGAGATCGTGGCGCTGCTGGCCGCCCAGGCGCACGAGCGCAAGGCCGCCACCGTGATGGTCACCCACGACACCGACCTGC
TGGAGGCCGCCGACCGGGTCGTCCACATGCGGGACGGCAAGCTGTCCTGA

Protein sequence : 
MTATTATTTGLALEQVTLEYGTGDTLVTALDEVTLTVEPGEFVAVVGPSGSGKSSLLAVAGALIHPTRGQVRIADVTVSG
AKAAELARLRRTRIGYVFQSGNLLASLTARDQLLLVPHLSGRITAEDRARADELLEAVGLTAKADRRPHELSGGERQRVG
LARALMNRPAVLLADEPTAALDRRRAREIVALLAAQAHERKAATVMVTHDTDLLEAADRVVHMRDGKLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcur_0347 YP_003297987.1 ABC transporter NC_008702.1.4606598. Protein 2e-33 47
Tcur_0347 YP_003297987.1 ABC transporter CP001581.1.gene598.p Protein 6e-38 41
Tcur_0347 YP_003297987.1 ABC transporter NC_012469.1.7686878. Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcur_0347 YP_003297987.1 ABC transporter VFG2059 Protein 4e-18 42