Gene Information

Name : tetA (ETAE_p036)
Accession : YP_003297630.1
Strain :
Genome accession: NC_013509
Putative virulence/resistance : Resistance
Product : class A tetracycline resistance protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 27775 - 29049 bp
Length : 1275 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCACCAACTTATCAGTGATAAAGAATCCGCGCGTTCAATCGGACCAGCGGAGGCTGGTCCGGAGGCCAGACGTGAA
ACCCAACAGACCCCTGATCGTAATTCTGAGCACTGTCGCGCTCGACGCTGTCGGCATCGGCCTGATTATGCCGGTGCTGC
CGGGCCTCCTGCGCGATCTGGTTCACTCGAACGACGTCGCCGCCCACTATGGCATTCTGCTGGCGCTGTATGCGTTGATG
CAATTTGCCTGCGCACCTGTGCTGGGCGCGCTGTCGGATCGTTTCGGGCGGCGGCCGGTCTTGCTCGTCTCGCTGGCCGG
CGCTGCTGTCGACTACGCCATCATGGCGACGGCGCCTTTCCTTTGGGTTCTCTATATCGGGCGGATCGTGGCCGGCATCA
CCGGGGCGACTGGGGCGGTAGCCGGCGCTTATATTGCCGATATCACTGATGGCGATGAGCGCGCGCGGCACTTCGGCTTC
ATGAGCGCCTGTTTCGGGTTCGGGATGGTCGCGGGACCTGTGCTCGGTGGGCTGATGGGCGGTTTCTCCCCCCACGCTCC
GTTCTTCGCCGCGGCAGCCTTGAACGGCCTCAATTTCCTGACGGGCTGTTTCCTTTTGCCGGAGTCGCACAAAGGCGAAC
GCCGGCCGTTACGCCGGGAGGCTCTCAACCCGCTCGCTTCGTTCCGGTGGGCCCGGGGCATGACCGTCGTCGCCGCCCTG
ATGGCGGTCTTCTTCATCATGCAACTTGTCGGACAGGTGCCGGCCGCGCTTTGGGTCATTTTCGGCGAGGATCGCTTTCA
CTGGGACGCGACCACGATCGGCATTTCGCTTGCCGCATTTGGCATTCTGCATTCACTCGCCCAGGCAATGATCACCGGCC
CTGTAGCCGCCCGGCTCGGCGAAAGGCGGGCACTCATGCTCGGAATGATTGCCGACGGCACAGGCTACATCCTGCTTGCC
TTCGCGACACGGGGATGGATGGCGTTCCCGATCATGGTCCTGCTTGCTTCGGGTGGCATCGGAATGCCGGCGCTGCAAGC
AATGTTGTCCAGGCAGGTGGATGAGGAACGTCAGGGGCAGCTGCAAGGCTCACTGGCGGCGCTCACCAGCCTGACCTCGA
TCGTCGGACCCCTCCTCTTCACGGCGATCTATGCGGCTTCTATAACAACGTGGAACGGGTGGGCATGGATTGCAGGCGCT
GCCCTCTACTTGCTCTGCCTGCCGGCGCTGCGTCGCGGGCTTTGGAGCGGCGCAGGGCAACGAGCCGATCGCTGA

Protein sequence : 
MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVAAHYGILLALYALM
QFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGF
MSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAAL
MAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLA
FATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGA
ALYLLCLPALRRGLWSGAGQRADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 3e-161 99
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 5e-174 99
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 2e-161 99
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 2e-161 99
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 2e-161 99
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 4e-174 99
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 3e-101 63
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 3e-101 63
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 3e-101 63
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 3e-101 63
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 9e-104 63
tetB AEA34667.1 tetracycline resistance determinant Not tested Not named Protein 4e-75 49
tetA(B) AAL08445.1 tetracycline resistance protein TetA(B) Not tested SRL Protein 4e-75 49
tetA(B) AEZ06045.1 tetracycline efflux protein Not tested Tn6167 Protein 5e-75 49
tetA YP_005797160.1 tetracycline resistance protein, class G (TETA(G)) Not tested AbaR4e Protein 1e-74 49
BJAB07104_00277 YP_008207742.1 Permeases of the major facilitator superfamily Not tested AbaR25 Protein 8e-75 49
BJAB0868_00281 YP_008211607.1 Permeases of the major facilitator superfamily Not tested AbaR26 Protein 8e-75 49
tetA(B) AEQ20905.1 tetracycline resistance protein Not tested Tn6166 Protein 8e-75 49
ABZJ_00260 YP_005524216.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Not tested AbaR22 Protein 1e-75 47
tet(H) YP_005176248.1 tetracycline efflux protein, class H Not tested ICEPmu1 Protein 1e-68 47
tetA(B) AFH57202.1 tetracycline resistance protein Not tested AbaR4a Protein 1e-75 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tetA YP_003297630.1 class A tetracycline resistance protein X75761.gene.p01 Protein 2e-160 99
tetA YP_003297630.1 class A tetracycline resistance protein CP001485.1.gene2821. Protein 2e-174 99
tetA YP_003297630.1 class A tetracycline resistance protein NC_011586.7045189.p0 Protein 3e-151 99
tetA YP_003297630.1 class A tetracycline resistance protein NC_010410.6002597.p0 Protein 2e-174 99
tetA YP_003297630.1 class A tetracycline resistance protein AF534183.gene.p01 Protein 8e-171 99
tetA YP_003297630.1 class A tetracycline resistance protein Y19114.gene.p01 Protein 8e-128 80
tetA YP_003297630.1 class A tetracycline resistance protein AF133140.gene.p01 Protein 6e-104 63
tetA YP_003297630.1 class A tetracycline resistance protein AF133139.gene.p01 Protein 5e-106 63
tetA YP_003297630.1 class A tetracycline resistance protein NC_010410.6002612.p0 Protein 6e-104 63
tetA YP_003297630.1 class A tetracycline resistance protein AF070999.gene.p01 Protein 1e-88 54
tetA YP_003297630.1 class A tetracycline resistance protein AY264780.2.gene3.p01 Protein 4e-81 54
tetA YP_003297630.1 class A tetracycline resistance protein Y19116.gene.p01 Protein 4e-78 54
tetA YP_003297630.1 class A tetracycline resistance protein L06940.gene.p01 Protein 1e-79 54
tetA YP_003297630.1 class A tetracycline resistance protein AY743590.gene.p01 Protein 5e-73 50
tetA YP_003297630.1 class A tetracycline resistance protein L06798.gene.p01 Protein 7e-69 50
tetA YP_003297630.1 class A tetracycline resistance protein AF038993.gene.p01 Protein 2e-70 49
tetA YP_003297630.1 class A tetracycline resistance protein CP004022.1.gene2534. Protein 5e-70 49
tetA YP_003297630.1 class A tetracycline resistance protein V00611.gene.p01 Protein 6e-75 49
tetA YP_003297630.1 class A tetracycline resistance protein NC_010558.1.6275971. Protein 2e-75 49
tetA YP_003297630.1 class A tetracycline resistance protein AF121000.gene.p01 Protein 7e-70 48
tetA YP_003297630.1 class A tetracycline resistance protein AJ420072.gene.p01 Protein 5e-68 48
tetA YP_003297630.1 class A tetracycline resistance protein Y15510.gene.p01 Protein 2e-69 48
tetA YP_003297630.1 class A tetracycline resistance protein AB084246.gene.p01 Protein 3e-75 48
tetA YP_003297630.1 class A tetracycline resistance protein AF090987.gene.p01 Protein 1e-64 47
tetA YP_003297630.1 class A tetracycline resistance protein NC_011595.7059241.p0 Protein 1e-54 44
tetA YP_003297630.1 class A tetracycline resistance protein NC_011586.7043399.p0 Protein 1e-54 44
tetA YP_003297630.1 class A tetracycline resistance protein NC_010410.6003291.p0 Protein 1e-54 44
tetA YP_003297630.1 class A tetracycline resistance protein AJ250203.gene.p01 Protein 1e-63 43
tetA YP_003297630.1 class A tetracycline resistance protein NC_009085.4918440.p0 Protein 3e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tetA YP_003297630.1 class A tetracycline resistance protein VFG1036 Protein 2e-75 49