Gene Information

Name : ETAE_p013 (ETAE_p013)
Accession : YP_003297606.1
Strain :
Genome accession: NC_013509
Putative virulence/resistance : Virulence
Product : Type IV secretory pathway component
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 8023 - 10581 bp
Length : 2559 bp
Strand : -
Note : -

DNA sequence :
ATGGGTCGGCACCAAGATGAAATCCCTTGGCTGGAGACATTGGGGAGCATCAACGGCGAGTCCGATGGTCAACACTCGCG
CGACAAGGAGGATGCCCAAGTGAAGGCAGAAAAAAGAAAGGTCCAGGAAGTGCCTTGGCACCGTGAAAATTCGGTGGCTG
AGTTCATTCCGTACCAGGCTCAAGTAAACGAAAACACCGTCAAAACTCAAGGCGGCGATTATCTCCAGGTCATCAAGCTG
GACGGCGTGGCTCATGAGTCCGCCGACCCGGAAGACGTGGAAATCTGGAAGGAGCAGATAAACATTCTGCTTCGCAATAT
TTCATCGCCTCAAGTGGCGCTATGGACAAACATCGTTCGCCGTGAAAACACCATCTTTCCAGGTGGTGAGTTCGCGGGGG
ACTTCGACAAGGGGCTGAACGACAAATATTCGGCCTACGTCACCAAAAACAAGATGATGGTCAACGAGCTTTACTTGACC
ATTGTCTACCGCCCAACGGCCACTAAAGCCCTGGGGTTCTTTTCCAAGATGGAGAAGAACAAAGAGGTTCTGAACCAACA
ACAATTCGAGGCCATCGAGAAGCTGGACGAAATCGTTTCGATTGCGACCAGTTCCCTTAATCGCTATGGCCCGCGTGTAC
TTAGCACATACATGCGTAACGACATAATCCATTCCGAAGTTTTGGAGTTCCTGGACTTCTTAGTGAATGGTGATTGGATG
CCCCGCGCTTTGCCTCGCAAGGTGCTGTCGGAGTGCATGGCCAGGATGCGGCCTTTTTTCGGCGCGGATGCTTTCGAGCT
GCGCGGCGTTGTGGACTCCAGAATGGGCGCGGTCCTGGGTATTTCTGAATACCCGGAGGGCACCGAAGCGGGCTTGCTGA
ATGCGTTGCTGTCGGCGCCTTTCCCTTTGGTGCTAACTCAGAGCTTCAATTTCCTATCCAAGGCTATCGCTATCGAGCTG
CTGGGCCGCCAGAAAAACCGTCTGGAAACAACCGGCGATCTGGCCGTGTCTCAGGTCGAAGCCATCGACGATGGCCTGGA
CGATCTGGCCTCTGGTCGTATCGTCTACGGGGAACATCACCTGTCGCTGACCGTGTTTGGTGAAGACGCCAGGGACTTGC
GCGGCAACCTGTCGGCGGCACGTTCCGAGCTGGCCGATTGCTCTATGGTCGTTGCCCGTGAAGATTGGGCGCTGGCTGCT
GCCTATTGGGCTCAACTGCCAGGCAATGCCAAGTATCGCCCGCGCCCTGCGCCTATTTCATCGCGCAACTTTGCCGGCTT
CTCCAGCTTCCACAACTACCCGACCGGCGAACGGACCGGCAACCAGTGGGGGCCGGCTGTGACAATGTTCAAAACCACGT
CCGGGGCGCCGTACTACTTCAACTTTCATGAGGCGCTGGACAGCTCCAAAGCGAGGAAAAAAGCCGAGCTGGAGCGCGAG
AAGGGCGCGGCAGCTCTCAAGGAGCTGGAGGCCAAGGAAGAACAGAAGGCCCTTGGTAACACGCTGATTATCGGGCCGTC
AGGCTCCGGTAAAACAGTGGTCCAGGGCTTCCTTATGTCGCAAAGCAAGAAATTCAATCCGACTCAGGTGATCTTCGACA
AAGACCGAGGCCTGGAAATCTACGTGCGGGCCAGTGGTGGCGTTTATCTGCCACTTCAAAACGGTGTGCCTACTGGTTTT
AACCCCTTCCAACTGGCGCCGACCGAAGACAATTTGCTGTTCCTTACCGACCTGGTGAAGAAAATCTGCGGCGGCAGCTT
CAATAACCAGGAAGAAAAGGAGATCGACAAGGCTGTGCGCGGCGTCATGGGGCTATCGAAGGAAAAGCGCCGGATAGGGC
GGTGCCTCGACTTCCTGGACCCGGTATCTCAAAACGGCCCCCATGCCCGCTTGGCTAAATGGTGTGAAGGTGGCTCGCTG
GGCTGGGTTCTCGACAACCCGGAAGACGCGCTGGACTTCGACAACAACACCATGTTCGGTTTCGACGTTACGGAGTTCCT
GGACAACGCCGAAGTACGGACGCCCGTTGTCATGTATCTGTTCCATCGTATTGAACAGCTTATCGACGGCCGCCGCTTCC
AAATGTTCATGGACGAGTTCTGGAAATTGCTCCTGGACGAGTATTTCGAGGACCTGGCGCAGAACAAGCAGAAGGTTATC
CGTAAACAGAACGGCATCATGGTCTATGGCACTCAGTCGCCTAAAGACGTGCTGCGTTCACCCATTGCCCACTCGCTGAT
CGAGCAGTGCGCAACCTATGTATTCATGCCTAACCCGAAGGCGGACCGGGCCGATTACGTCGATGGCTTCCATCTGACTG
AGCGGGAATTTCAACTGATCAAGGAAGACATGGCACCCGGTTCCCGTCGCTTCCTGGTCAAGCAGGGCCAGAACAGCGTT
GTGGCTGAATTGAACCTGAAAGGTTTTGACGACGAGTTGGCGGTTATTTCCGGCACCACGGATAACGTCAACCTAATGAC
TCAAATCATCGAGCAGCACGGCGACGATCCGGCCGTCTGGCTGCCCATCTTTCACGAGCAACGGAGGTTTGCATCATGA

Protein sequence :
MGRHQDEIPWLETLGSINGESDGQHSRDKEDAQVKAEKRKVQEVPWHRENSVAEFIPYQAQVNENTVKTQGGDYLQVIKL
DGVAHESADPEDVEIWKEQINILLRNISSPQVALWTNIVRRENTIFPGGEFAGDFDKGLNDKYSAYVTKNKMMVNELYLT
IVYRPTATKALGFFSKMEKNKEVLNQQQFEAIEKLDEIVSIATSSLNRYGPRVLSTYMRNDIIHSEVLEFLDFLVNGDWM
PRALPRKVLSECMARMRPFFGADAFELRGVVDSRMGAVLGISEYPEGTEAGLLNALLSAPFPLVLTQSFNFLSKAIAIEL
LGRQKNRLETTGDLAVSQVEAIDDGLDDLASGRIVYGEHHLSLTVFGEDARDLRGNLSAARSELADCSMVVAREDWALAA
AYWAQLPGNAKYRPRPAPISSRNFAGFSSFHNYPTGERTGNQWGPAVTMFKTTSGAPYYFNFHEALDSSKARKKAELERE
KGAAALKELEAKEEQKALGNTLIIGPSGSGKTVVQGFLMSQSKKFNPTQVIFDKDRGLEIYVRASGGVYLPLQNGVPTGF
NPFQLAPTEDNLLFLTDLVKKICGGSFNNQEEKEIDKAVRGVMGLSKEKRRIGRCLDFLDPVSQNGPHARLAKWCEGGSL
GWVLDNPEDALDFDNNTMFGFDVTEFLDNAEVRTPVVMYLFHRIEQLIDGRRFQMFMDEFWKLLLDEYFEDLAQNKQKVI
RKQNGIMVYGTQSPKDVLRSPIAHSLIEQCATYVFMPNPKADRADYVDGFHLTEREFQLIKEDMAPGSRRFLVKQGQNSV
VAELNLKGFDDELAVISGTTDNVNLMTQIIEQHGDDPAVWLPIFHEQRRFAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 6e-171 45
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 5e-171 45
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 2e-161 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_p013 YP_003297606.1 Type IV secretory pathway component VFG2259 Protein 6e-171 46
ETAE_p013 YP_003297606.1 Type IV secretory pathway component VFG2233 Protein 7e-161 44
ETAE_p013 YP_003297606.1 Type IV secretory pathway component VFG2211 Protein 4e-143 42