Gene Information

Name : ETAE_0928 (ETAE_0928)
Accession : YP_003294984.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : -
Position : 1013461 - 1014351 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGCTAACCGGTTTGATCGCTGCACCGCATACCCCGTTTAAGGCCGACGGCAGCGTTAACTACCCGGTCATCGA
CCGCATTGCCGAACACCTGATCGGCGATGGCGTCACCGGCGCCTATGTCTTGGGCACCACCGGTGAAGGTATTCAATGTT
CGGTGGAAGAGCGCATGCGCATCGCCGAACGCTGGGTCGACGCCAGTCAGGGAAAGCTGGATCTGATCGTTCATACCGGC
GCGCTGAGCATTGCCGACGCCGTGACGCTGGCGCGCCATGCCAACACCCTGGATATCATGGCGACCTCCGTGATCGGCCC
CTGCTTCTTTAAGCCGGGCAGCGTAGATGACCTGGTCGAGTACTGCCGCCTGGTGGCCGAGGCCGCGCCGGATAAAGGTT
TTTATTACTATCACTCCAGCATGTCCGGCCTGAGCATCGACATGGAGCGCTTCCTGCAAAGTGCCTCCGGGCGCATTCCC
AACCTGAGCGGCATGAAGTTCAACGCCAGCGATATGTATGAGTACCAGCGCTGCCTGCGGGTAGAGAACGGCCGCTTCGA
TATTCCGTTCGGCGTCGATGAGTTTATGCCCGCCGGGCTTGCCTGTGGCGCCACCAGCGCGGTCGGCAGCACCTATAACT
ACGCCGCGCCGCTCTATCTGCGCCTGATGGAGAGCTTCCGCCGCGGCGATATGCAGGATGTCGCCCGCTGCATGGATAAG
GTGATCGCCATCATCCGAGTTCTGGTCGAATACGGCGGCGTCGCCGCGGGCAAGGTCGCCATGCAGCTGCACGGTATCGA
CGTCGGCGATCCGCGTCGCCCGCTGCGCCCGATGACGGCCCAGCAAAAGGCCGATGCGCTGGCCAAATTCCGCGCCGCCG
AGTTCCTGTAA

Protein sequence : 
MKKLTGLIAAPHTPFKADGSVNYPVIDRIAEHLIGDGVTGAYVLGTTGEGIQCSVEERMRIAERWVDASQGKLDLIVHTG
ALSIADAVTLARHANTLDIMATSVIGPCFFKPGSVDDLVEYCRLVAEAAPDKGFYYYHSSMSGLSIDMERFLQSASGRIP
NLSGMKFNASDMYEYQRCLRVENGRFDIPFGVDEFMPAGLACGATSAVGSTYNYAAPLYLRLMESFRRGDMQDVARCMDK
VIAIIRVLVEYGGVAAGKVAMQLHGIDVGDPRRPLRPMTAQQKADALAKFRAAEFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 6e-104 73
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 6e-104 73
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 1e-103 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_0928 YP_003294984.1 N-acetylneuraminate lyase VFG1109 Protein 3e-104 73