Gene Information

Name : ETAE_0900 (ETAE_0900)
Accession : YP_003294956.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : porcine attaching-effacing associated protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 982795 - 983556 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAGTTCTAGCCACGATGATTTTTGCATTTTCTTCAGCCGCATTTGCCGACATTCATTTATATGGACCCGGTGG
CCCCCACGTCGCCTTACAGGCGGCAGCGGCACAGTATACCCAAAAAACTGGGGTGCCGATTACCGTACACTACGGCCCTC
AGGCAACGTGGAATGATGCAGCAAAGAAGAATGCGGATATCCTATTTGGTGCCTCAGAGCAATCGGCCTTGGCCATCGTG
CGCGATCATCAGAATAACTTCAGTGAGAAAGATATTCAGCCGCTGTATTTACGGCAGAGCATCCTGCTGGTAAAAAAAGG
AAATCCTAAAAATATCAAGGGAGTTGAAGACCTCTCTCGCCCCGGGATTGGGATTATCGTAAACGATGGCGGTGGTACGA
GTAATACCTCTGGCACGGGTGTATGGGAAGATATCGCGGGGCGTAAAGGGGATATTAAGACCGTTATCGGCATACGGCAA
AATATTATCCTCTTTGCGCCCAATAGCGGGAGCGCCCGTAAAGCTCTGGAAGAGCAGCCTCAAGCCGATGTTTGGATAAC
CTGGGCGGATTGGGCTATCAGTAATCCAGGAATCGGTGATGTCGTTAAGATTGAACCAGACTATATAATATGGCGCGATA
TGAATATTACAGTCCGTAAAGACTCAGATGAAGAAACTCGCCAATTTGCCGCCTGGCTGCGCTCCGATGAAGCCCTTCCG
ATATTTATAAAATACGGTTGGTTGAGATCCGCCGCGTCTTAA

Protein sequence : 
MKKVLATMIFAFSSAAFADIHLYGPGGPHVALQAAAAQYTQKTGVPITVHYGPQATWNDAAKKNADILFGASEQSALAIV
RDHQNNFSEKDIQPLYLRQSILLVKKGNPKNIKGVEDLSRPGIGIIVNDGGGTSNTSGTGVWEDIAGRKGDIKTVIGIRQ
NIILFAPNSGSARKALEEQPQADVWITWADWAISNPGIGDVVKIEPDYIIWRDMNITVRKDSDEETRQFAAWLRSDEALP
IFIKYGWLRSAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAA82706.1 AcfC Virulence VPI Protein 3e-57 55
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 3e-57 55
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 3e-57 55
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 3e-57 55
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 3e-57 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_0900 YP_003294956.1 porcine attaching-effacing associated protein VFG0839 Protein 1e-83 74
ETAE_0900 YP_003294956.1 porcine attaching-effacing associated protein VFG0105 Protein 2e-57 55