Gene Information

Name : esaV (ETAE_0878)
Accession : YP_003294934.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : type III secretion protein, HrcV family
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4789
EC number : -
Position : 955898 - 957955 bp
Length : 2058 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACGGTCAATAGCTGGCTACACAAACTCACCGCGCGCCAGGATATCATTCTGGCGGCCATGCTGTTGCTGGCCGT
TTTCATGATGATCATTCCCCTGCCGACGCCCCTGATAGACATCCTGATCGCCATCAACCTCACGCTGTCGATCACCCTGC
TGATGATGGCGGTCTACATTCGGGAACCCATGGAGTTCTCCGCCTTTCCCTCCGTCCTGCTCATCACCACGCTGTATCGT
CTGGCGCTGACCATCAGCACCAGCCGCCTGATTCTGCTGCAGCACGATGCCGGCGAGATCGTCTATACGTTTGGCAACTT
TGCCGTCGGGGGCAATCTGGCCGTCGGCCTCATCGTGTTCGCCATCATTACCGTCGTGCAGTTTATCGTGATTACCAAAG
GCTCTGAGCGCGTGGCCGAGGTCAGCGCCCGCTTCTCCCTCGACGCGATGCCGGGCAAACAGATGAGCATCGACGGCGAT
ATGCGCGCCGGGATCATCGACGCGACAGAGGCTCGGCGCCAGCGGGCCCTGGTGCAAAAAGAGAGCCAGCTCTATGGCGC
GATGGATGGCGCGATGAAGTTTGTCAAAGGGGACGCCATCGCCTCGATCATCGTCATACTGGTCAATATTGTCGGGGGGA
TCTGCGTCGGCGTGTTTATGCATGAGATGAGCGCGGGCGATGCGGCGGCAACCTACGCCATCCTGTCCGTCGGCGATGGC
CTGATTGCCCAGATCCCGGCGCTGCTCATTTCGATCGCCGCCGGGATCATCGTCACCCGGGTGCCGGGCGAAAACCGACG
TAACCTCGCCAGCGAACTCACCGAGCAGATCCTGCGCCAGCGCCAGGCGCTGTGGATCGTTGCCGCGGTGCTGGCCCTGT
TTGCCGCCCTGCCCGGCTTTCCTACCCTGATCTTCATCGGCCTGGGCGCGGGGCTGGCCGCTATCGCATACTCGCTGAGG
CGCAAAGAGCGGCAGCGCTCCCCGCTCGCCGCCGGCCACTCCGCGAGCGACCACGACGAGAGCGGACAGGAGGGCGCGCC
GCTGCTCATCGGCGCGACGCCGCTCGCGCTACGCCTGCCCGACGCGCTGGCCCGCGATCCCACCCTCGCCCAGGCGCTGG
CCACGCTGCGGGCGGAAAAGCTGGAGCTGGCGGGGCTGCCGCTGCCGGAGATTCAGATCCAGCCAGATAGCAGCCTGGGC
CCGGATCAGTTTACCCTGCTGCTGTATCAAGAGCCGGTGCTCTCGATGACCCTTCCCCACCTCGCCCTGCTCGATCTTGC
CGCGCCGACGCTGCGCCAGGTCGACCACCGGGAGACGCTCCCCTTCGGCGGGATCACCCTGCAGTGGATAGCTCAGGAGC
AGGCCGAAGGCAGCGCCGCCATCGGCGTCAACCGCTATCAGGGCAATGCCCGGATTGCCTATCTCGTCTCGCTGGCGCTG
GATCGCTACGGCGCCGAGTTCATCGGCGTCCAGGAGGCCCGCTACCTCATGGACCAGATGGAGCAGCGCTACGGCGAACT
GGTCAAAGAGCTGCAGCGTCAGCTGCCGGTCGCCCGGGTCGCCGATGTGCTGCAGCGCCTGGTCGCGGAGAGCGTCTCCA
TCCGCGATCTGCGCGCCATCTTCGAGGCGCTGGTCGAGTGGGCGCCGCGGGAAAAAGATCCCGTGATGTTGGCCGAATAT
GCTCGGCTGGCCCTACGCCGCCACATTATCGGGCGCCAGCGCCACGGCCAGCCCTGGGTCAAGGCCTGGCTTATCGGCAG
CCATATTGAGCAGAAGGTGCGCGAGTCTGTCCGCCAGACCTCTGCGGGCTCCTACTCCGCGCTCTCGCAGCAGGAGAATC
AGGCGATCCTGACCGAGATCCACGCGGCGCTGGAGCGCAGCGGCGCCGTCAACACGGCCATCGTGACCGCGATCGATATC
CGTCGCTTTATCCGTAAGCTGATCGAACGCGAGCTGTTCACCACCGCCGTGCTCTCGTTTCAGGAGCTGGACGATGAGGC
GGAGCTCAAGGTGTTAGGACACATTGAGCTAATAGGAGACACCCATGCGGCTGCCTGA

Protein sequence : 
MKTVNSWLHKLTARQDIILAAMLLLAVFMMIIPLPTPLIDILIAINLTLSITLLMMAVYIREPMEFSAFPSVLLITTLYR
LALTISTSRLILLQHDAGEIVYTFGNFAVGGNLAVGLIVFAIITVVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGD
MRAGIIDATEARRQRALVQKESQLYGAMDGAMKFVKGDAIASIIVILVNIVGGICVGVFMHEMSAGDAAATYAILSVGDG
LIAQIPALLISIAAGIIVTRVPGENRRNLASELTEQILRQRQALWIVAAVLALFAALPGFPTLIFIGLGAGLAAIAYSLR
RKERQRSPLAAGHSASDHDESGQEGAPLLIGATPLALRLPDALARDPTLAQALATLRAEKLELAGLPLPEIQIQPDSSLG
PDQFTLLLYQEPVLSMTLPHLALLDLAAPTLRQVDHRETLPFGGITLQWIAQEQAEGSAAIGVNRYQGNARIAYLVSLAL
DRYGAEFIGVQEARYLMDQMEQRYGELVKELQRQLPVARVADVLQRLVAESVSIRDLRAIFEALVEWAPREKDPVMLAEY
ARLALRRHIIGRQRHGQPWVKAWLIGSHIEQKVRESVRQTSAGSYSALSQQENQAILTEIHAALERSGAVNTAIVTAIDI
RRFIRKLIERELFTTAVLSFQELDDEAELKVLGHIELIGDTHAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0266 YP_002345347.1 secretion system apparatus protein SsaV Virulence Not named Protein 4e-146 57
ssaV NP_456114.1 putative type III secretion protein Virulence SPI-2 Protein 9e-134 52
ssaV NP_805085.1 secretion system apparatus protein SsaV Virulence SPI-2 Protein 9e-134 52
ssaV CAA70536.1 secretion system apparatus Virulence SPI-2 Protein 6e-134 52
ssaV NP_460379.1 secretion system apparatus protein SsaV Virulence SPI-2 Protein 9e-134 52
ssaV YP_216422.1 secretion system apparatus protein SsaV Virulence SPI-2 Protein 6e-134 52
escV AFO66414.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-124 48
escV AFO66296.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 8e-125 48
escV AAL57541.1 EscV Virulence LEE Protein 4e-124 47
escV YP_003223476.1 translocator EscV Virulence LEE Protein 6e-124 47
escV AAC38382.1 EscV Virulence LEE Protein 2e-124 47
escV YP_003232152.1 T3SS structure protein EscV Virulence LEE Protein 5e-124 47
unnamed AAL06368.1 EscV Virulence LEE Protein 6e-122 47
escV AAC31514.1 L0035 Virulence LEE Protein 5e-124 47
escV ACU09459.1 EscV protein Virulence LEE Protein 5e-124 47
escV CAI43875.1 EscV protein Virulence LEE Protein 4e-124 47
escV YP_003236089.1 putative translocator EscV Virulence LEE Protein 1e-123 47
escV CAC81861.1 EscV protein Virulence LEE II Protein 4e-124 47
escV NP_290269.1 hypothetical protein Virulence LEE Protein 7e-124 47
escV AAK26714.1 EscV Virulence LEE Protein 4e-124 47
ECs4569 NP_312596.1 hypothetical protein Virulence LEE Protein 7e-124 47
lssD AAO18050.1 LssD Virulence TTSS locus Protein 1e-115 46
ysaV AAS66840.1 YsaV Not tested SSR-1 Protein 1e-95 41
hrcV NP_791229.1 type III secretion protein HrcV Virulence Hrp PAI Protein 1e-90 41
hrcV AAG33877.1 HrcV Virulence Hrp PAI Protein 4e-91 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0514 Protein 4e-134 52
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0813 Protein 3e-124 47
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0729 Protein 9e-125 47
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0064 Protein 1e-119 46
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0384 Protein 2e-118 45
esaV YP_003294934.1 type III secretion protein, HrcV family VFG0198 Protein 6e-110 44