Gene Information

Name : gabD (ETAE_0571)
Accession : YP_003294629.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 625907 - 627358 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAGCTCCATGATATGGGCCTGTTTCGTCAACAGGCGCTGATTGACGGGGTGTGGTGCGATGCCGATAGCGGCGA
CGTCATGACGGTGATTAACCCGGCAAGCGGGGATACGCTGGGCAGCGTACCGAAGATGGGGGCGGCGGAGACCCGACGGG
CGATCGAGGCTGCCGCCCACGCGCTGCCGGGCTGGCGCGCCCGCACGGGGAAGGCGCGGGCGCAGATCCTGCGCCGCTGG
TTTGATCTGATCCTGGCGCATCAAGAGGATCTGGCTCGGCTGATGACCCTGGAGCAGGGGAAGCCGCTGGCGGAGTCGCG
CGGTGAGATAGCCTATGCGGCGTCGTTTATTGAGTGGTTTGCCGAAGAGGCCAAGCGGGTCTACGGCGATACGATCCCCG
CTCCGCAGGGAGATAAGCGTCTGCTGGTGATCAAGCAGCCCATCGGCGTAACGGCGGCGATTACGCCGTGGAATTTTCCA
GCGGCGATGATCACCCGCAAGGCCGGGCCGGCGCTGGCCGCCGGCTGTACCATGGTGCTGAAGCCCGCCAGCCAGACGCC
CTACTCTGCGCTGGCGCTGGCGGAGCTAGCGCTGCGTGCCGGGGTTCCGCAGGGGGTCTTTAGCGTGGTGACCGGTTCGG
CCGGGGCGGTGGGAAATGAGCTGACCGCGAATCCGCTGGTGCGCAAGCTGAGCTTCACCGGATCGACGGAGATCGGGCGT
CAGCTGATGGCGCAGTGCGCGCACGATATCAAGAAAGTCTCTCTGGAGCTGGGCGGTAATGCGCCGTTTATCGTTTTTGA
TGATGCCGATCTGGATCAGGCGGTGGCGGGAGCGATGGCCAGTAAGTTTCGTAATGCTGGCCAAACCTGCGTGTGCGCTA
ATCGCCTGTATGTACAGGAGGGCATTTATGAGCGCTTTGCCGAGAAGCTGTGCAGCGCGGTACAGGCGCTGAAGGTGGGC
AATGGGCTGGATGACGGCGTGACGGTCGGTCCGCTGATCGATAGCCGGGCGCGGGCCAAAGTGGAGGCGCATATTGCCGA
TGCGGTGGCGCGCGGCGCCCGTATCGCCTGCGGCGGTCAGGCTGACGCCCGCGGCGAGAACTTCTTTTGTCCGACCGTTT
TGCTGGACGTGCCCGCCGATGCGCAGGTCGCGCGCGAGGAGACGTTTGGTCCGCTGGCGCCGCTGTTTCGTTTCCGTGAC
GAAGATGAGGTTATCGCCCGGGCCAATGCGACGGAGTTCGGTCTGGCCTCCTACTTCTATACTCGCGACGTGGGGCGGGT
ATTCCGCGTCGCCGAGGCGCTGGAGTATGGCATCGTCGGTATCAACAGTGGGCTTATCTCCAATGAGATGGCGCCGTTTG
GCGGGGTAAAATCCTCTGGACTGGGCCGAGAAGGTGCCAAATACGGCATTGAGGACTATCTGGAAATTAAATATTTGTGC
CTCGGTCTGTAG

Protein sequence :
MMQLHDMGLFRQQALIDGVWCDADSGDVMTVINPASGDTLGSVPKMGAAETRRAIEAAAHALPGWRARTGKARAQILRRW
FDLILAHQEDLARLMTLEQGKPLAESRGEIAYAASFIEWFAEEAKRVYGDTIPAPQGDKRLLVIKQPIGVTAAITPWNFP
AAMITRKAGPALAAGCTMVLKPASQTPYSALALAELALRAGVPQGVFSVVTGSAGAVGNELTANPLVRKLSFTGSTEIGR
QLMAQCAHDIKKVSLELGGNAPFIVFDDADLDQAVAGAMASKFRNAGQTCVCANRLYVQEGIYERFAEKLCSAVQALKVG
NGLDDGVTVGPLIDSRARAKVEAHIADAVARGARIACGGQADARGENFFCPTVLLDVPADAQVAREETFGPLAPLFRFRD
EDEVIARANATEFGLASYFYTRDVGRVFRVAEALEYGIVGINSGLISNEMAPFGGVKSSGLGREGAKYGIEDYLEIKYLC
LGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-146 66
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 3e-82 41