Gene Information

Name : ETAE_3428 (ETAE_3428)
Accession : YP_003297470.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3614030 - 3615196 bp
Length : 1167 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCTTTCAGACATACAAATCAAACGCGCAAAACCACAAGACAAACCCTACACACTGAACGACGGGCAAGGGCTATC
AATACTCATCAAACCGGATGGTTCGAAAGGATGGCGTTTCCGTTTCCGCTTTGCCGGGAAAGCGCGGTTAATGTCATTTG
GTAGCTACGATTTGGTGAGCCTTGCAGAAGCCCGTGAAAAGCGCGAGGTCGCCCGTAAGCAAGTTGCTAATGGAATCGAC
CCGGTTGAGGAACGGAAGGCGCAAAAACTGGCACAGCAGCTTTCAACAGAAAACTCATTCGAAGCCATAAGTCGCGAATG
GCATGCAAACAAAGCCGACCGCTGGACAGTGGCATACCGAGACGAAATCATTAAGACCTTCGAACAAGATGTTTTCCCGT
TCATCGGCAAACGTCCTATCGGTGAGATCAAACCTTTAGAATTGCTTGAGGTGCTGCGACGAATAGAGAAACGTGGAGCA
CTGGAGAAAACACGCAAGGTACGCCAGCGGTGCGGAGAGGTTTTTCGCTACGCGATCATAACTGGCCGAGCTGAATACAA
CCCTGCCCCTGATTTAGCTATCGCATTGGCCGTGCCGAAGCAAAAGCATCATCCTTTTTTATCTGCCGAAGAATTGCCTC
ATTTTATCAGAGATCTTGAAGCCTATACCGGCAGCATCATCACTAAAAATGCGACTAAGATAGTCATGTTGACTGGTGTG
AGGACGCAGGAAATGCGCTTTGCTACGTGGGATGAGGTTGATTTTGATAAGAGGATTTGGGAGATACCCGCAGAACGAAT
GAAAATGCGCCGTCCCCATATCGTGCCGTTATCAACGCAGGCTATGGAGCTGTTCAAACAGCTACAGCCAATCACTGGTC
ACTATCCTTATATTTTTATTGGACGCAACAACCGCAGGAAGCCTATAAGTAAGGAAAGTATCAATCAGGTAATTGAGTTG
CTGGGATATAAAGGGCGAGCTACCGGTCACGGTTTTAGACACACAATGTCGACTATCCTACATGAGCAGGGATTTGATAG
TGCGTGGATTGAAATACAACTTGCGCATGTGGATAAAAATAGCATTCGAGGGACATATAATCATGCTCAATATCTTGAAA
AAAGAAGGGAAATGCTTCAGTGGTATAGCAACTATCTTTTAAATTAA

Protein sequence : 
MALSDIQIKRAKPQDKPYTLNDGQGLSILIKPDGSKGWRFRFRFAGKARLMSFGSYDLVSLAEAREKREVARKQVANGID
PVEERKAQKLAQQLSTENSFEAISREWHANKADRWTVAYRDEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGA
LEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV
RTQEMRFATWDEVDFDKRIWEIPAERMKMRRPHIVPLSTQAMELFKQLQPITGHYPYIFIGRNNRRKPISKESINQVIEL
LGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHVDKNSIRGTYNHAQYLEKRREMLQWYSNYLLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 3e-145 72
aec33 AAW51716.1 Int Not tested AGI-3 Protein 1e-145 72
int AAC31482.1 CP4-like integrase Not tested LEE Protein 4e-144 71
int ACU09430.1 integrase Not tested LEE Protein 4e-144 71
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 6e-144 71
ECs4534 NP_312561.1 integrase Not tested LEE Protein 6e-144 71
int AAD44730.1 Int Not tested SHI-2 Protein 2e-143 71
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-143 71
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-143 71
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-143 71
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 3e-113 59
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 7e-114 55
intA AAB00935.1 integrase A Not tested vap locus Protein 5e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_3428 YP_003297470.1 integrase VFG0783 Protein 2e-144 71
ETAE_3428 YP_003297470.1 integrase VFG0598 Protein 2e-143 71