Gene Information

Name : ETAE_3084 (ETAE_3084)
Accession : YP_003297128.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3247686 - 3248468 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence :
ATGATGGTGGAACTGCAACATCAACGGCTGATGGTGCTTGCCGAACAGCTGCAACTGGACAGTCTGATCAGCGCAGCGCC
AGCCCTGTCACAGCAGGCAGTGGAGCAGGAATGGAGTTACATGGACTTCCTGGAGCATCTGCTTCACGAAGAGAAACTGG
CCCGACATCAGCGTAAACAGGCAATGTATACCCGGATGGCGGCCTTCCCGGCAGTGAAAACGTTCGAAGAATACGACTTT
ACCTTCGCCACCGGTGCGCCGCAGAAGCAGATCCAGTCGCTGCGTTCACTGAGCTTCATAGAGCGCAACGAAAACATCGT
GTTGCTGGGGCCATCCGGCGTGGGGAAAACGCATCTGGCAATAGCAATGGGCTACGAAGCGGTACGGGCGGGTATCAAGG
TTCGCTTCACTACGGCGGCGGATCTCTTGCTTCAGCTGTCCACGGCACAACGCCAGGGGCGCTATAAAACAACGCTTCAC
CGTGGCGTGATGGCACCAAAGCTGCTCATCATCGATGAAATAGGCTACCTGCCGTTCAGCCAGGAAGAAGCCAAGCTGTT
CTTCCAGGTCATCGCCAAACGTTATGAAAAGAGCGCGATGATCCTGACCTCCAACCTGCCGTTCGGGCAGTGGGATCAGA
CGTTCGCCGGTGATGCGGCGCTAACATCCGCGATGCTGGACCGGATCTTACACCACTCACACGTTGTTCAAATAAAAGGA
GAGAGTTATCGACTGAAACAGAAACGAAAGGCCGGGGTTATCGCTGAAGCTAATCCTGAGTAA

Protein sequence :
MMVELQHQRLMVLAEQLQLDSLISAAPALSQQAVEQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDF
TFATGAPQKQIQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLH
RGVMAPKLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKG
ESYRLKQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-85 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-118 97
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-118 97
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-118 97
unnamed CAA21402.1 - Not tested HPI Protein 2e-118 97
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-118 97
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-119 97
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-118 97
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-119 97
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-118 97
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-119 97
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-118 97
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-117 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_3084 YP_003297128.1 transposase/IS protein VFG1460 Protein 1e-85 99
ETAE_3084 YP_003297128.1 transposase/IS protein VFG1515 Protein 1e-118 97
ETAE_3084 YP_003297128.1 transposase/IS protein VFG1627 Protein 1e-118 97
ETAE_3084 YP_003297128.1 transposase/IS protein VFG1606 Protein 1e-118 97
ETAE_3084 YP_003297128.1 transposase/IS protein VFG1663 Protein 1e-117 96