Gene Information

Name : ETAE_3054 (ETAE_3054)
Accession : YP_003297098.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3217129 - 3218151 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCATAAGCAGGGTATGAGCAGTCGGGCGATCGCCAGGGAACT
GGGTATCTCCCGTAACACCGTAAAGCGTTATCTGCGTGCGCAGTCTGAGCCGCCAAAATATACGCCGCGTCCCGCAACCG
CTTCACTCCTGGATGAATACCGGGACTATATTCGGCAACGCATCGCCGATGCTCATCCTTATAAAATCCCTGCAACGGTC
ATCGCCCGCGAGATCACGGAGCAGGGTTATCGTGGTGGCATGACCATCCTGAGAGAGTTCATACGTTCACTTGCCATTCC
TCAGGAACAGGAGCCTGTCGTGCGCTTCGAAACAGAGCCAGGACGACAGATGCAGGTTGACTGGGGCACCATGCGTAATG
GCAAATCACCACTTCATGTGTTCGTTGCCGTTCTGGGGTTCAGCAGAATGCTGTATATCGAGTTCACTGACAATATGCGC
TACGACACCCTGGAAGAATGCCACCGTAATGCGTTCAGCTTCTTCGGTGGCGTACCGCGTGAAGTGCTCTACGACAACAT
GAAAACGGTAGTGCTACAGCGCGATGCTTATCGGGCCGGGCAACACCGGTTCAACCCTTCACTGTGGCAGTTCGGCAAAG
AGATGGGCTTCTCTCCACGGCTGTGCCGCCCCTTCAGAGCACAGACTAAAGGCAAGGTGGAGCGGATGGTGCAGTACACC
CGCAACAGCTTCTACATCCCGCTAATGACTCGCCTGCGTCCGTTGGGGATCACCGTCGATGTTGAAACAGCCAACCGCTA
CGGCCTGCGCTGGTTGCACGATGTCGCTAACCAGCGCAGGCACGAAACAATACAGACCCGTCCCTGCGATCGCTGGATCG
AAGAGCAGCAGTCCATGCTGGCTCTACCGACGGAGAAAAAACAGTATGACGTGCAGGTAGACGAAAGCCTGGTGACCTTC
GACAGGCAGCCACTGCACCACCCGCTATCCATCTATGACACGTTCTGCAGAGGAGCCGCATGA

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLRAQSEPPKYTPRPATASLLDEYRDYIRQRIADAHPYKIPATV
IAREITEQGYRGGMTILREFIRSLAIPQEQEPVVRFETEPGRQMQVDWGTMRNGKSPLHVFVAVLGFSRMLYIEFTDNMR
YDTLEECHRNAFSFFGGVPREVLYDNMKTVVLQRDAYRAGQHRFNPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPLGITVDVETANRYGLRWLHDVANQRRHETIQTRPCDRWIEEQQSMLALPTEKKQYDVQVDESLVTF
DRQPLHHPLSIYDTFCRGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 1e-154 91
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 4e-155 91
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 4e-155 91
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 4e-155 91
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 1e-155 91
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-155 91
y2411 NP_669718.1 transposase Not tested HPI Protein 1e-155 91
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-155 91
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 1e-155 91
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-155 91
unnamed CAA21403.1 - Not tested HPI Protein 1e-155 91
unnamed AAG37051.1 unknown Not tested espC PAI Protein 6e-146 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_3054 YP_003297098.1 transposase VFG1514 Protein 2e-155 91
ETAE_3054 YP_003297098.1 transposase VFG1626 Protein 2e-155 91
ETAE_3054 YP_003297098.1 transposase VFG1607 Protein 2e-155 91
ETAE_3054 YP_003297098.1 transposase VFG1461 Protein 8e-155 91
ETAE_3054 YP_003297098.1 transposase VFG0780 Protein 3e-146 88