|
Name : cadA3 (ETAE_3006) Accession : YP_003297050.1 Strain : Edwardsiella tarda EIB202 Genome accession: NC_013508 Putative virulence/resistance : Virulence Product : lysine decarboxylase, inducible Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 3169727 - 3171862 bp Length : 2136 bp Strand : + Note : - DNA sequence : ATGAAAGACATTCTGTTCCTGTGTAACCCCTCGCCGACCTTCAAGCGGATTCCGCTGGAGGAGCTGTACGCCCAGCTGCG CGATCGGGGGTTTAACATCATCGAAAGCACCTCGGTCGACGATCTGCTGGATCTGGTGCGCAACAACGCCCAGCTGGCCG GGGTCGTCTTCGACTGGGATAGCTACAGTCTGGATCTGTGCAAGCACATCACGGCGCTGAACGAAATGCTGCCGCTGTAT GCCTTCGCCAACACCCACTCCACGCTGGACGTCAGCCTGGGCGACCTGCGCATGAACATTCAGTTCTTTGAGTATACGCT GGGTGGCGCGGCCGACATCGCCGACAAGATCCGCCAGGGAACCGACGACTACATCGATACCATCATGCCGCCGCTGACCA AGGCGCTGTTCCACTACGTCAAAGAGGGAAAATACACCTTCTGTACCCCGGGGCACATGGGCGGCACCGCGTTCCAGAAA AGCCCGGTCGGCAGCCTGTTCTATGACTTCTTTGGCGCCAACACCATGAAGTCCGACATCTCCATCTCCGTATCCGAGCT GGGCTCCCTGCTGGACCACTCCGGCCCGCACAAAGAGGCGGAAGAGTACATCGCCCGCACCTTCAACGCCGATCGCAGCT ACATGGTGACCAACGGCACCTCGACCGCCAACAAGATCGTCGGCATGTACGCCGCGCCGGCCGGCAGCACTATCCTGATC GACCGTAACTGTCACAAATCGCTGACCCACCTGATGATGATGAGCGACGTTATCCCGATCTACCTGCGGCCGACCCGCAA CGCCTACGGCATTCTGGGGGGGATTCCCCAGCGCGAGTTCACCCACGACACCATCGAAGCGCGGGTGAAAAATACCCCGA ACGCCACCTGGCCGGTGCATGCGGTGGTCACCAACTCCACCTATGACGGCCTGTTCTACAACGCGGAGTACATCAAGAAA ACCCTGGACGTAAAATCCATCCACTTTGACTCCGCCTGGGTGCCCTACACCAACTTCAGCCCGATCTACCAGGGGCTGTG CGGTATGAGCGGCGAGCGCGTCGAGGGCAAGGTTATCTACGAAACCCAGTCCACCCACAAACTGCTGGCGGCGTTCTCGC AGGCGTCCATGATCCACGTGAAAGGCGACTTCAACCAAGAAACCTTTAACGAAGCCTACATGATGCACACCTCCACCTCA CCGCACTATGGCATCGTGGCCTCCATCGAAACCGCGGCGGCGATGATGAAGGGTCACGCCGGTAAACGCCTGATCAATGA CTCTATCGCGCGAGCCATCCGCTTCCGTAAGGAGATCAAGCGCCTGCGCAGCGAGTCCGACGGCTGGTTCTTCGACGTCT GGCAGCCGGACAATATTGACCAGGTCGCCTGCTGGAAGCTGGATCCGAAAGAGTCCTGGCACGGCTTTAAGGGCATCGAT GACAACCACATGTACCTTGACCCGATCAAGGTCACCCTGCTGACCCCGGGGATGAACCCGGACGGCACGATGGCGGATGA CGGTATCCCGGCCGCCATCGTGGCCAAGTACCTGGACGAGCACGGCATCATCGTCGAGAAGACCGGCCCGTACAACCTGC TGTTCCTGTTCAGCATCGGCATCGACAAGACCAAGGCCCTGAGCCTGCTGCGCGCGCTGACCGACTTCAAGCGGGCCTAT GACCTGAACCTGCGCGTGAAGAACATGCTGCCGTCGCTGTACCGCGAAGATCCGGAGTTCTATGAGCACATGCGGATCCA GGCGCTGGCCCAGGGCATCCACGCGCTGATCCTACACCATAACCTGCCGGATCTGATGTACCGCGCCTTCGAGGTGCTAC CGACCATGGTGCTGAACCCGCACGACGCCTTCCAACAGGAGCTGCGCGGCCAGGCCGAAGAGGTCTACCTCGACGAGATG ATCGGCAAGGTCAACGCCAACATGATCCTGCCGTACCCGCCGGGCGTGCCGCTGGTGATGCCGGGCGAAATGCTGACGGA GGAGAGCCGGCCGGTGCTGGAGTTTCTGCAGATGCTGTGCGAAATCGGCGCCCACTATCCGGGCTTCGAAACCGACATCC ACGGCGCCTATCGTCAGGCCGACGGGCGCTATACGGTGAAAGTGCTCAAGCAGTAG Protein sequence : MKDILFLCNPSPTFKRIPLEELYAQLRDRGFNIIESTSVDDLLDLVRNNAQLAGVVFDWDSYSLDLCKHITALNEMLPLY AFANTHSTLDVSLGDLRMNIQFFEYTLGGAADIADKIRQGTDDYIDTIMPPLTKALFHYVKEGKYTFCTPGHMGGTAFQK SPVGSLFYDFFGANTMKSDISISVSELGSLLDHSGPHKEAEEYIARTFNADRSYMVTNGTSTANKIVGMYAAPAGSTILI DRNCHKSLTHLMMMSDVIPIYLRPTRNAYGILGGIPQREFTHDTIEARVKNTPNATWPVHAVVTNSTYDGLFYNAEYIKK TLDVKSIHFDSAWVPYTNFSPIYQGLCGMSGERVEGKVIYETQSTHKLLAAFSQASMIHVKGDFNQETFNEAYMMHTSTS PHYGIVASIETAAAMMKGHAGKRLINDSIARAIRFRKEIKRLRSESDGWFFDVWQPDNIDQVACWKLDPKESWHGFKGID DNHMYLDPIKVTLLTPGMNPDGTMADDGIPAAIVAKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAY DLNLRVKNMLPSLYREDPEFYEHMRIQALAQGIHALILHHNLPDLMYRAFEVLPTMVLNPHDAFQQELRGQAEEVYLDEM IGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 83 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA3 | YP_003297050.1 | lysine decarboxylase, inducible | VFG1670 | Protein | 0.0 | 67 |
