Gene Information

Name : xerD (ETAE_2929)
Accession : YP_003296973.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3090263 - 3091162 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
GTGCACGAGCAGGATCAGGCGCTGATCGAACAGTTTTTGGACGCGCTGTGGCTGGAGAAAAATCTGGCGGAAAATACCTT
GGCCTCCTATCGCCAGGATCTGCGCACGCTGGCCGAATGGCTGGCCTATCACGATCTCACCCTGCTTACGGCGGCGCACG
GCGATCTGCAGGACTTTTTCGCCCAGCGCATGGACGGGGGCTATAAGGCGTCCAGCTCGGCCCGCCTGCTCAGCGCGCTG
CGCCGCTGCTATCAGTATCTGTACCGAGAGAAGCTGCGCAGCGACGATCCGAGCGCGCTGCTGGCTTCGCCCAAGCTGCC
GCAGCGGCTGCCGAAAGATCTTTCTGAAGCCCAGGTGGATGCCCTGCTACAGGCGCCCGCCATCGATACGCCGCTGGAGC
TGCGTGATAAGGCGATGCTGGAGCTGCTGTACGCTACCGGTCTGCGGGTGTCCGAACTGGTGGGGCTGGCGCAGGAGGAT
ATCAGCCTGCGCCAGGGTGTGGTACGGGTGATCGGCAAAGGCAATAAAGAGCGCCTGGTTCCCCTTGGGGAGGAGGCGAT
CTACTGGATTGAGTACTATCTGGAGTATGGCCGCCCGTGGCTGGTGAACGGCCAGACGGTCGCGGCGCTGTTTCCCAGCA
ATCGCGCCCGCCAGATGACGCGCCAGACCTTCTGGCACCGGATTAAGCACTATGCTGTCCTGGCGGGGATCGATGCGGAG
CGTCTGTCGCCGCACGTGCTGCGCCATGCGTTTGCCACCCATCTGTTGAACCATGGCGCCGATTTACGTGTCGTACAGAT
GCTTTTGGGGCACAGCGATCTTTCTACGACCCAGATTTATACCCATGTAGCGACAGAGCGTCTGAGACAGCTACATCAAC
AGCATCATCCCCGCGCTTGA

Protein sequence :
MHEQDQALIEQFLDALWLEKNLAENTLASYRQDLRTLAEWLAYHDLTLLTAAHGDLQDFFAQRMDGGYKASSSARLLSAL
RRCYQYLYREKLRSDDPSALLASPKLPQRLPKDLSEAQVDALLQAPAIDTPLELRDKAMLELLYATGLRVSELVGLAQED
ISLRQGVVRVIGKGNKERLVPLGEEAIYWIEYYLEYGRPWLVNGQTVAALFPSNRARQMTRQTFWHRIKHYAVLAGIDAE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-56 63
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-56 63