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Name : lysS (ETAE_2924) Accession : YP_003296968.1 Strain : Edwardsiella tarda EIB202 Genome accession: NC_013508 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3084814 - 3086331 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGTCTGAACAACAGCAACAAGGCGCCGAACAGGCTCTGGACTTAAACAACGAAATGCAGACTCGCCGCGAAAAACTGGC GGCTCTGCGTAAGGAAGGCATCGCTTTCCCTAACGATTTCCGCCGCGACACCACCTCTGATAAGCTGCACAGCCTGTATG ACGGTAAGAGCAAGGAAGAGTTGGAAGCGCTGAACGTTGAAGTTTCCGTTGCCGGGCGCATGATGACCCGCCGTATCATG GGTAAAGCCTCTTTCGTTACGCTGCAGGATATGGGTGGCCGTATTCAGCTGTATGTTGCCCGTGACGATCTGAAAGACGA TGTTTACAGCGAACAGTTCAAAAAGTGGGACCTGGGTGACATCATCGGCGCACGCGGTACTCTGTTCCGTACTCAGACCG GCGAGCTGTCTATTCATTGCCACTCTATCCATCTGCTGACCAAGGCCCTGCGCCCGCTGCCGGACAAATTCCACGGTCTG TCTGACCAGGAAACCCGCTATCGCCAGCGCTATCTGGACCTGATCGCCAACGAATCTTCCCGCGAGACTTTCCGTACCCG CTCTAAGATCCTGGCCGCTATCCGCAACTTCATGGTCAACAAAGGCTTCATGGAAGTCGAAACCCCGATGATGCAGGTGA TCCCGGGGGGCGCATCCGCCCGTCCGTTCATCACCCATCACAATGCGCTGGACATCGATATGTACCTGCGTATCGCGCCG GAGCTGTACCTGAAGCGTCTGGTGGTCGGTGGCTTCGAGCGCGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGCGT CTCTCCGCGTCATAACCCTGAGTTCACCATGATGGAACTCTATATGGCCTACGCGGACTACAAAGACCTGATCGTGCTGA CCGAAGAGCTGTTCCGCACCATCAGCCAGGATGTTCTGGGCAGCAGCGTGGTGCAGTACGGCGATCAGACCTTCGATTTC GGCAAGCCGTTTATCAAGATGAGCATGAAAGAGGCCATCTGCCACTACCGTCCGGACATCGCCTCTGCCGATCTGGATGA TATGGAGAAGGCCTGCAAGATCGCCGAGTCTCTGGGCATCAAGATCGAGAAAAGCTGGGGCCTGGGCCGCGTACAGTGCG AAATCTTTGATGAAACGGCAGAGAGCCAGCTGATTCAGCCGACCTTCATCACCGAATACCCGGCAGAGGTTTCTCCGCTG GCGCGCCGTAACGACGAGAACCCGTTCATCACCGACCGCTTTGAATTCTTCATCGGCGGCCGTGAAATCGGTAACGGCTT CTCCGAGCTGAACGACGCCGAAGATCAGGCAGAGCGTTTCCTGGATCAGGTGAAAGCCAAAGATGCCGGTGACGACGAAG CCATGTTCTACGACGAAGACTACGTGACCGCGTTGGAGCACGGCCTGCCGCCGACCGCCGGTCTGGGCGTGGGTATCGAC CGTATGATGATGCTGTTCACCAACAGCCACACCATCCGTGATGTGATCCTGTTCCCGGCGATGCGTCCGCAGAAATAA Protein sequence : MSEQQQQGAEQALDLNNEMQTRREKLAALRKEGIAFPNDFRRDTTSDKLHSLYDGKSKEELEALNVEVSVAGRMMTRRIM GKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDLGDIIGARGTLFRTQTGELSIHCHSIHLLTKALRPLPDKFHGL SDQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDF GKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQLIQPTFITEYPAEVSPL ARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAERFLDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGID RMMMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-167 | 67 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003296968.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-167 | 67 |
