Gene Information

Name : cadB1 (ETAE_0283)
Accession : YP_003294341.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : lysine/cadaverine transport protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 309063 - 310382 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGGCTTCTGTAAAAAAAATCGGGCTTATCGCCTGTACCGGGGTGGTTGCCGGGAACATGATGGGCAGCGGTATCGCGCT
GCTGCCCGCCAACCTGGCAAGCCTAGGGTCAATTGCCGTATGGGGCTGGCTGATCGCGCTGGTGGGCGCCGTTTCTCTGG
CCTATGTGTATGCCCGACTGGCCACCAAAAACCCCCAGGAGGGTGGTCCGGTTGCCTACGCCGGTGAGGTCGGTGCCGCC
TTCGGGTTCCAGACCGGGGTGCTGTACTACCACGCCAACTGGATCGGTAACCTGGCTATCGGTATTACCGCCGTCTCTTA
TTTATCGACCTTCTTCCCGGTGCTTAACAGCCCGGTACCGGCGGGTATCGCCTGTATCGCTATCGTGTGGATTTTCACCT
TCGTTAACATGCTGGGGGGCGCCTGGGTCAGCCGCCTGACCACCTTGGGGCTGGTGTTGGTACTGATCCCGGTTATCGGG
ACCGGGATCGCCGGCTGGTTCTGGTTTGAGCCAACGACCTATATGGCGAACTGGAACACCTCCGGCGGCACGGATTATCA
CGCTATTATTAAAAGTATTCTGCTCTGCCTGTGGGCGTTTATCGGGGTGGAGTCTGCGTCCGTCAGTACCGGGATGGTGA
AGGATCCGCAGCGTAACGTCCCGCTGGCAACCATGATGGGGACTTTCCTGGCCGGTATCGTCTATATTGCGGCGACGCAG
GCTATCGCCGGGATGTATCCGGCCCATCAGATGGCCGCCTCCGGCGCGCCGTTCGCCATCAGCGCCTCGACCATGGTGGG
CAGCTGGGCTGGCCCGGTAGTGTCCGCCTTCACCGCCTTCGCCTGTCTGACGTCGTTGGGCTCCTGGATGATGCTGGTCG
GTCAGGCCGGCGCGCGTGCGGCCCATGACGGTAACTTCCCGAAAATCTACGGTGAGCTGGACAAGAATGGCCTGCCGAAG
AAAGGGCTGTTCCTGGCCGCGCTCAAGATGACCGTTCTGATGGTGCTGATCACCGTGATGAACGCCAGCGGCGGTAAGGC
CTCTGACCTGTTCGGCGAACTGACCGGCATCGCGGTGCTGTTGACCATGCTGCCTTACTTCTACTCCTGTATTGACCTGA
TCCGCTTTGATGGAGCCAACATCAAGAACGTACTGAGTCTGCTGGCGTCCATTCTCGGCTGTGTGTTCTGCTTTATCGCT
TTGATGGGGGCCAACTCGATCGAGCTGTCCGGTACCTTTATCGTCAGCCTGATCATTCTGATGTTCTACTCACGTAAGCT
GGGCTCCGCACAGGATAAAGGCAGCGCCCCGCGTACTTAA

Protein sequence :
MASVKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAVWGWLIALVGAVSLAYVYARLATKNPQEGGPVAYAGEVGAA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNSPVPAGIACIAIVWIFTFVNMLGGAWVSRLTTLGLVLVLIPVIG
TGIAGWFWFEPTTYMANWNTSGGTDYHAIIKSILLCLWAFIGVESASVSTGMVKDPQRNVPLATMMGTFLAGIVYIAATQ
AIAGMYPAHQMAASGAPFAISASTMVGSWAGPVVSAFTAFACLTSLGSWMMLVGQAGARAAHDGNFPKIYGELDKNGLPK
KGLFLAALKMTVLMVLITVMNASGGKASDLFGELTGIAVLLTMLPYFYSCIDLIRFDGANIKNVLSLLASILGCVFCFIA
LMGANSIELSGTFIVSLIILMFYSRKLGSAQDKGSAPRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 7e-156 80
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 9e-156 80
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 6e-134 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB1 YP_003294341.1 lysine/cadaverine transport protein VFG1671 Protein 4e-134 67