Gene Information

Name : ETAE_2742 (ETAE_2742)
Accession : YP_003296788.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2877923 - 2879119 bp
Length : 1197 bp
Strand : +
Note : -

DNA sequence : 
GTGGCACGGACAACACGCCCCCTTACCAACACCGAAGTTCTGCGTGCTAAAGCGTTAGAGAAGGATCTAACGCTGCATGA
TGGCGATGGCCTTTTCCTGATAGTGAAAACCAGCGGGAAAAAGCTCTGGCGCTTCCGTTATCAACGTCCGGCGACAAAAC
AGCGGACAATGATGGGGCTAGGTGCTTTCCCCGCCCTTTCACTTGCTGACGCCCGAGGGTTAAGAGCGGATTACCTTGCT
TTGTTAGCCAACGAAATTGACCCACAAATTCAGGCCGAAGTTGCAGAGGAACAGCAGCAAATCGCTCTGGACAGTATTTT
TTCAACGGTCGCCGCTAACTGGTTCCAGCTCAAAAGCAAAAGCGTTACCCCCGAATACGCAAAAGACATTTGGCGCTCAC
TGGAGAAAGATGTATTCCCTGCCATCGGTGAGCTCCCTGTTCAGCAAATCAAAGCCCGAATACTGGTTGAAGCCCTTGAA
CCAATCAAGGCACGCGGGGCGCTAGAGACTGTACGTCGACTGGTGCAGCGCATTAACGAGATAATGATATATGCCGTAAA
CACTGGTCTGATTGATACCAATCCCGCATCAGGTGTTGGAATGGCCTTTGAGAAGCCTAAAAAACAAAACATGCCGACAC
TACGGCCAGAAGAATTGCCGAAGCTGATGCGTTCTTTAGTCATGTCAAATCTGTCTGTTCCGACTCGCTGTCTAATCGAA
TGGCAACTCCTGACACTAGTGCGTCCTTCTGAGGCCTCCGGCGCTCGGTGGTCAGAGATCGATCTCGATGCCAAGCTCTG
GACAATTCCAGCCGAACGGATGAAGGCCAAGCGAGAGCACATTGTTCCTTTATCCACTCAGGCATTAGACATTCTAGAGG
TAATGAAACCTATTAGTGCGCATCGTGAGCATGTCTTCCCAAGCAGAAATGACCCTAAACAACCAATGAATAGCCAGACT
GCCAATGCAGCATTAAAACGGATTGGGTATGGGGGAAAGTTGGTAGCTCACGGATTACGCTCCATTGCCAGTACATCTAT
GAATGAAGCTGGATTTAATTCAGATGTCATTGAGGCCGCATTGGCACATATTGATAAAAATGAAGTTCGGCGAGCATACA
ACCGTTCAACATATCTTCAAAAAAGAATTGAATTAATGAGTTGGTGGGGTGCATTAATTAGAGTATCATGCAGGTAA

Protein sequence : 
MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGLRADYLA
LLANEIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPEYAKDIWRSLEKDVFPAIGELPVQQIKARILVEALE
PIKARGALETVRRLVQRINEIMIYAVNTGLIDTNPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIE
WQLLTLVRPSEASGARWSEIDLDAKLWTIPAERMKAKREHIVPLSTQALDILEVMKPISAHREHVFPSRNDPKQPMNSQT
ANAALKRIGYGGKLVAHGLRSIASTSMNEAGFNSDVIEAALAHIDKNEVRRAYNRSTYLQKRIELMSWWGALIRVSCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-102 52
int AAK20773.1 integrase Not tested VPI Protein 3e-102 51
int AAK20803.1 integrase Not tested VPI Protein 3e-102 51
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-102 51
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-102 51
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-102 51
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 8e-87 48
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-86 47
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-86 47
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-64 42
int CAC39282.1 integrase Not tested LPA Protein 1e-66 42
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-67 42
int AAD44730.1 Int Not tested SHI-2 Protein 6e-68 42
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-65 41
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-65 41
int ACU09430.1 integrase Not tested LEE Protein 2e-65 41
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-65 41
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 6e-67 41
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 6e-67 41
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 4e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_2742 YP_003296788.1 integrase VFG1092 Protein 9e-87 47
ETAE_2742 YP_003296788.1 integrase VFG0783 Protein 1e-65 41
ETAE_2742 YP_003296788.1 integrase VFG0598 Protein 2e-67 41