|
Name : intC (ETAE_2465) Accession : YP_003296511.1 Strain : Edwardsiella tarda EIB202 Genome accession: NC_013508 Putative virulence/resistance : Unknown Product : prophage Sf6-like integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2594426 - 2595583 bp Length : 1158 bp Strand : + Note : - DNA sequence : ATGCTCACGGTTAAACAGATTGAAGCAGCAAAGCCAAAAGACAAGCCCTATCGCCTACTGGATAGCAACGGGCTATACCT CTACATACCAGCCTCTGGAAAAAAGGTGTGGCAACTGCGTTTCAAACTAGGCGGTAAAGAGAAAATTTTAACCGTGGGTA AATATCCTCTTGTTTCTTTACAAGAAGCTCGTGACAAAGCCTACCAGGCAAGAAAGGATATTGCCGATGGTATAGATCCA GTAAGGACCAAAAAGGAAAGCGAGAAGGATAACTCATTCTCCGTGATCTATAAGGAATGGTACGCCCACAAGCGCCAGGT ATGGTCTGAAGGGTATGCGAATGAATTACAGCGGATGTTTGAAACTGATATTCTCCCGCTCATAGGTGCGATGGAGATGG ATGAAATCGAGCCTATGGCCCTTTTATCTGTTGTGAGGCGGATTGAAGAGCGCGGAGCCATGGAGAGAGCAAACAAGGCC CGGCGTCGTTGTGGTGAGGTGTTTCGTTACGCCATAGTAACGGGGAGAGCAAAATACAATCCAGCGCCGGATCTCGCTGA TGCAATGAAGGGATACAGGAAGAAAAATTTCCCTTTCCTTCCTGCTGAACAGATCCCTGCATTCAACCAGGCATTGGCTG GATATTCAGGCAGTATAGTTTCGAAGATTGCCACTATGGTGTTGCAGTATACAGCCCTGCGAACCAAAGAGCTCAGATCT ATGAAATGGCCTAACGTCGATTTCACTTCCGGACTAATTACGATCGACGAATCGGAAATGAAGAGCCGTAAGCCTCACAT TGTCCCTATGTCGCACCAAGTCGCTGAGTTGCTCAAAGCATTAAAGCCAGTCACTGAACCTGTATCGCAGTTTGTATTTG CCGGTAGAAATGATAAAAATAAGTCGATCAGTGAAAATGCCGTTCTATTGGTCATTCGCCAAATCGGCTATGAAGGGCTG GCGAGTGGTCACGGTTTCCGCCACCAATTTAGCACCATTCTACACGAGCACGAATGGCCTTCTGAGGCGATAGAGCGCCA GCTTGCTCACACAGATAAACAGTCCGTGCGCGGGATCTATAACCATGCACAATATCTGGATAAAAGGCGAGAGATGATGC AATGGTGGGCTGACTGGATAGACGGCAATGTCGCATGA Protein sequence : MLTVKQIEAAKPKDKPYRLLDSNGLYLYIPASGKKVWQLRFKLGGKEKILTVGKYPLVSLQEARDKAYQARKDIADGIDP VRTKKESEKDNSFSVIYKEWYAHKRQVWSEGYANELQRMFETDILPLIGAMEMDEIEPMALLSVVRRIEERGAMERANKA RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPAEQIPAFNQALAGYSGSIVSKIATMVLQYTALRTKELRS MKWPNVDFTSGLITIDESEMKSRKPHIVPMSHQVAELLKALKPVTEPVSQFVFAGRNDKNKSISENAVLLVIRQIGYEGL ASGHGFRHQFSTILHEHEWPSEAIERQLAHTDKQSVRGIYNHAQYLDKRREMMQWWADWIDGNVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 5e-91 | 51 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 5e-91 | 51 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 7e-91 | 51 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 7e-91 | 51 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 5e-90 | 51 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-91 | 51 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-91 | 51 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-90 | 51 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-90 | 51 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-90 | 51 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 6e-88 | 50 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 2e-86 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| intC | YP_003296511.1 | prophage Sf6-like integrase | VFG0783 | Protein | 3e-91 | 51 |
| intC | YP_003296511.1 | prophage Sf6-like integrase | VFG0598 | Protein | 7e-91 | 51 |
