Gene Information

Name : ETAE_2255 (ETAE_2255)
Accession : YP_003296301.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, pilin FimA
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 2374617 - 2375144 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACGTTGTTTTTTAAAGCAGCTGGAGCTATGACCATCGCACTGGTAACGTTTGGTAGCCAAGCTGCGAGTGGGCA
AGGGGTTGTGAATTTTAGTGGTACTGTAATTACCGCGCCATGTGGTATTGCTCCGGAATCTGCCGATCAATCGATTGATT
TTGGTCAGATCTCGAAGAGCCATCTTGAGGCGGGTGGCATTTCCGTGAAGAAGAATATTGATATTAAACTGGTTGGTTGC
GATGCGACCGCGCTGGCTCAGACCGGTAGTGCCAAGGTGACATTTACTGGCGTTACTATTACCGGCGCGCCTACCGAGTT
AGGAACGACGGGCTCAACGGGTACGGCCATTGTTATTTCTAGTGAGGATGGCAGCTTAGTCTCATTTGGTAATGCTGGAT
CTGCACAAAAACTGAAGGTTGGCGATAATATTCTGCGTTATTCTGCATGGGTTAAAAGTGCTACGGGTGGTACATTGGCT
GAGGGTGACTTTGCATCCGTGGCTAACTTTAATATTACCTACCAATAA

Protein sequence : 
MKTLFFKAAGAMTIALVTFGSQAASGQGVVNFSGTVITAPCGIAPESADQSIDFGQISKSHLEAGGISVKKNIDIKLVGC
DATALAQTGSAKVTFTGVTITGAPTELGTTGSTGTAIVISSEDGSLVSFGNAGSAQKLKVGDNILRYSAWVKSATGGTLA
EGDFASVANFNITYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 2e-41 57
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 3e-35 53
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 5e-35 53
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 5e-29 49
papA AAC61718.1 PapA Virulence PAI I CFT073 Protein 2e-17 49
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 1e-30 46
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 2e-30 46
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 7e-26 46
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 9e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_2255 YP_003296301.1 P pilus assembly protein, pilin FimA VFG0893 Protein 6e-31 46
ETAE_2255 YP_003296301.1 P pilus assembly protein, pilin FimA VFG0882 Protein 2e-26 46
ETAE_2255 YP_003296301.1 P pilus assembly protein, pilin FimA VFG1550 Protein 4e-27 44