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Name : ETAE_2252 (ETAE_2252) Accession : YP_003296298.1 Strain : Edwardsiella tarda EIB202 Genome accession: NC_013508 Putative virulence/resistance : Virulence Product : P pilus assembly protein, porin PapC Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2371300 - 2373846 bp Length : 2547 bp Strand : - Note : - DNA sequence : ATGAAAAATAATAAGCAGTTCACGATTAGTAAAATTGCGGTATCCGTTTTGCTGTCACTTTGGGCAGGAAGCGCTTACGC CGTGGATTTTAATACTGATGTATTAGATGCAGCAGATAAGAAAAATATTGATTTTTCAAGATTTTCTCAAGCCGGATACA TCATGCCTGGGCAGTACCAGATGCAGGTTATGGTTAATGGACAAGCGATTAGTCCTTCATCACTGCCAGTCTCTTTTTTG GATCAAACAGGTCCGGCTCCGCGAAATGGCGAACAAGCTTTACCGCAGGCCTGCCTGACACCACCGATGGTGACGTTGAT AGGGTTGACCGCGTCTTCTCTGGAGAAAGTGACTTACTGGGATGATGGAAAGTGTGCAGATTTAACTGCGCTAAAAGGCG TTACGCTTCGCCCGGATTTATCCAATGGTATTTTGGCGATTAATATGCCACAGGCTTGGATGGAGTACTCGGATGCCTCC TGGCTGCCGCCATCGCGTTGGGATAACGGAATCCCTGGCTTATTGCTGGATTACAATATTAGCGCTACGGCCAATAGTCC TCATCAGGGGCAACAATCTCAGTCAGTCAACTATAACGGTACCGTGGGGGCAAACTTAGCCTCATGGCGTATGCGCGCTG ACTATCAGGGTGCAGTGAATCATATTTCAGGCAGCGGCCAGGGCAGCGATACCCAGTTTGATTGGAACCGCTTCTATATG TATCGGGCGATTCCACGCTGGCGTGCTAAGTTGACATTGGGCGAGAATTATACCAATTCAGATATCTTCAACGCCTGGCG CTATCTTGGTACTAGCCTCGAAAGCGATGATCGCATGCTACCGCCGAAACTGCGTGGATATGCGCCGCAGATCTCGGGCA TCGCAGATACCAATGCCCGGGTAGTTGTATCCCAGCAAGGACGTATTTTATATGACTCTACGGTTCCTGCGGGTCCGTTT ACTATCCAGGACTTAGACAGCTCTGTACGTGGGCGTTTAAATGTAGAGATTATTGAGCAGAATGGCCAGAAGAAAACGTT TCAGGTTGATACGGCATCTGTACCTTATCTGACGCGTCCAGGTCAAATTCGCTACAAGTTATTCTCAGGTCGTTCTCGCA ATGGTAATCATACGACGGAAGGCCCGCTGTTTATGGCAGGAGAGGCTTCATGGGGGATCAATAATACCTGGTCACTCTAT GGTGGGGCAGTAGCTGCCGGGGAATATAATGCTTTGGCCCTGGGGGCTGGTCGTGATTTATACCAGCTGGGTACTCTCGC GGTGGATGTTACTCAATCCGTGGCCAACCTGCCTGGGATTGGTACCAAGCAAGGGAAGTCTTGGCGGCTGAGTTACTCTA AACGCTTTGATGAAGCTAATGCAGATATCACTTTCGCCGGTTATCGATTCTCCGAGCGAAATTATATGACGATGGAGCAA TATCTCGATGCTCGCTATAGAAATAACTTGCGTGGTCGAGAGAAGGAGCTGTATACCGTTTCTTTGAATAAATCTTTTGA TGATTGGAATACCTCTATTGGGGTGCAATACAGTTATCAAACATATTGGGATCAACGCTCGTCAGATAACTATTCAGTAT CTTTGAATAATTACTTTGATGTCTTCGGGATTAAAAATATATCTGCAGGTATTTCTGCGTCACGCGCTAGATACTCTCGT AACAGTGATATTCCTGGGGTGAATGATGCTTATAATGATTCTATTTTTATGCGCCTTTCTATTCCATGGAATAACGGTAC TGTCAGCTATAGTGGTAACATGAGTGCTGGCCGATATACTCAGACCGCAGGTTATAGTGACTCCCTCAATGGGGGACTGG ACAGTTACAACGTGAGTGCCGGTTTGAGTACTGGAGATAATCAGGGGAATCAGGGGCAGGTCAGTGGCTATTATAATCAC AGCAGTCCGTTGGCTAATTTATCTGCCAATTTCTCAACGCTACAGCGTGGTTATACTTCCTTTGGGTTAAATGCTTCAGG CGGTGCGACATTAACGACGAAAGGGATCGCGCTGCATGCCGGGGGCGTGAATGGTGGCACCCGACTATTAGTCGATACCG ATGGTATTGGTGGGGTGCCTATAGACGGCGGACGCGTGTTTACCAACCGCTGGGGGATTGGGGTTGTTACGGATGTGAAT AGCTATTACAGAAATACGACATCTGTTGACTTAAATAAATTGCCGGAGGATATGGAGGCAACTCGCTCAGTTGTTGAGTC GGTATTGACTGAGGGGGCAATTGGTTATCGTAAGTTTGAAGTGCTAAAAGGTGCGCGTTTATTTGTTGTATTGCGTTTGG CTGATAATACGGTGCCGCCTTTTGGTGCCAGTGTCACTAATGCACAAGGGCGTGAACTTGGCATGGTTGGCGATGCCGGC TTGGCATGGCTAAGCGGCGTTGTCGCTGGAGAGAAAATTAATGTTGGATGGGGTGAACAGGTTCATTGTGTTAGTCAGGT ACCTGAGAAAATTAAGTCTGAACAACAATTATTATTGCCTTGTCGGGTGCCGGGAGAAATAAAATAA Protein sequence : MKNNKQFTISKIAVSVLLSLWAGSAYAVDFNTDVLDAADKKNIDFSRFSQAGYIMPGQYQMQVMVNGQAISPSSLPVSFL DQTGPAPRNGEQALPQACLTPPMVTLIGLTASSLEKVTYWDDGKCADLTALKGVTLRPDLSNGILAINMPQAWMEYSDAS WLPPSRWDNGIPGLLLDYNISATANSPHQGQQSQSVNYNGTVGANLASWRMRADYQGAVNHISGSGQGSDTQFDWNRFYM YRAIPRWRAKLTLGENYTNSDIFNAWRYLGTSLESDDRMLPPKLRGYAPQISGIADTNARVVVSQQGRILYDSTVPAGPF TIQDLDSSVRGRLNVEIIEQNGQKKTFQVDTASVPYLTRPGQIRYKLFSGRSRNGNHTTEGPLFMAGEASWGINNTWSLY GGAVAAGEYNALALGAGRDLYQLGTLAVDVTQSVANLPGIGTKQGKSWRLSYSKRFDEANADITFAGYRFSERNYMTMEQ YLDARYRNNLRGREKELYTVSLNKSFDDWNTSIGVQYSYQTYWDQRSSDNYSVSLNNYFDVFGIKNISAGISASRARYSR NSDIPGVNDAYNDSIFMRLSIPWNNGTVSYSGNMSAGRYTQTAGYSDSLNGGLDSYNVSAGLSTGDNQGNQGQVSGYYNH SSPLANLSANFSTLQRGYTSFGLNASGGATLTTKGIALHAGGVNGGTRLLVDTDGIGGVPIDGGRVFTNRWGIGVVTDVN SYYRNTTSVDLNKLPEDMEATRSVVESVLTEGAIGYRKFEVLKGARLFVVLRLADNTVPPFGASVTNAQGRELGMVGDAG LAWLSGVVAGEKINVGWGEQVHCVSQVPEKIKSEQQLLLPCRVPGEIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 72 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 0.0 | 67 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 67 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 0.0 | 67 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 0.0 | 67 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 0.0 | 67 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ETAE_2252 | YP_003296298.1 | P pilus assembly protein, porin PapC | VFG1548 | Protein | 0.0 | 67 |
| ETAE_2252 | YP_003296298.1 | P pilus assembly protein, porin PapC | VFG0884 | Protein | 0.0 | 67 |
| ETAE_2252 | YP_003296298.1 | P pilus assembly protein, porin PapC | VFG0895 | Protein | 0.0 | 67 |
