Gene Information

Name : ETAE_2247 (ETAE_2247)
Accession : YP_003296293.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : major pilu subunit operon regulatory protein PapB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2365795 - 2366097 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence :
ATGAATGAGAATCGTCTATCCGATAGAAAACATATAGATCGGTTTTTATATCCTGGAAAAGTTCCCATCGAACATTTTGA
AATGTTAGTTGAATTAAGTGGCATCCGTAGCAAGCGTGTGATAATGGCATTGGAAAGATATTTGGTTGGTGGTGAAAAAA
GAAAAACATTATGTGAGACTAATGCGGTAAGCCTCTCCTATTTTTCGGTAAAGCTAAAACAGTTACATAACTGCAGCGTT
CTAGTGATGAAATTATGCCCATACTATGATTTTTCCTTAGCGAAAAATAAAAATGACAAATAG

Protein sequence :
MNENRLSDRKHIDRFLYPGKVPIEHFEMLVELSGIRSKRVIMALERYLVGGEKRKTLCETNAVSLSYFSVKLKQLHNCSV
LVMKLCPYYDFSLAKNKNDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixB CAE85162.1 PixB protein Not tested PAI V 536 Protein 2e-11 46
APECO1_3518 YP_854257.1 PapB-like protein Virulence PAI I APEC-O1 Protein 2e-11 42
papB YP_002414018.1 pap operon regulatory protein PapB Not tested Not named Protein 2e-11 42
papB AAC61719.1 PapB Virulence PAI I CFT073 Protein 1e-11 42
papB AAL67418.1 PapB Virulence PAI II CFT073 Protein 1e-11 42
papB AAZ04473.1 P pilus protein Virulence PAI I APEC-O1 Protein 1e-11 42
prfB CAD42032.1 PrfB protein Virulence PAI II 536 Protein 3e-12 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_2247 YP_003296293.1 major pilu subunit operon regulatory protein PapB VFG1551 Protein 1e-12 42
ETAE_2247 YP_003296293.1 major pilu subunit operon regulatory protein PapB VFG0436 Protein 5e-10 42