Gene Information

Name : metB (ETAE_1929)
Accession : YP_003295977.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2033941 - 2035083 bp
Length : 1143 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCAGTTTGCGACCCAAAGCGTACACAGCGGCAGCCATGACGACGCCTATGGCGCGGTAATGCCGCCGATTTATGC
CACCTCAACCTTTGCCCAGCGCGCGCCGGGCGAGCACCGCGGCTTTGAATACGCCCGTAGCGGCAACCCCACGCGCCAGG
CGCTGGAGCAGGCTATCGCCGAGCTGGAGGGGGGACGACAGGGCTATGCCTTTGCCTCTGGGCTGGCGGCTATCGCCACG
GTGCTGGAGCTGCTGGACAGCGGCAGCCACATCATCGCGCTGGACGACGTCTACGGCGGCACCTGGCGCCTGCTGGAGTG
CGTGCGCAGTCGCAGCGCCGGGCTGCAGGTCAGCTGGGTGAGCCCCGACGACCTGGCGGGAATCGAGGCCGCCATTCGGC
CACAGACCAAGATGATCTGGGTAGAGACGCCGACCAATCCCCTGCTGAAGCTGGCGGATCTGCGCGCCATCGCCGCGCTG
GCGCAGCGCCACGATCTGCTCTGCGTCGCCGACAATACCTTTGCCTCTCCGGCGCTGCAGCGGCCGCTGGAGAGCGGGTT
TGATATCGTCGTGCACTCGGCCACCAAGTACCTCAACGGTCACTCCGACGTACTGGCCGGGCTCGCCGTGGTGGGCGACA
ACCCGCCGCTGGCCGAGCGTCTGGCCTATCTGCACAACGCCCTCGGCGCCGTACTTGACCCGTTCAGTAGCTTCCTGACG
CTGCGCGGGATCCGCACCCTGGCCCTGCGCATGGAGCGCCACAGCACCAATGCGAGCGCGCTGGCGCAGTGGCTGGCGCA
GCACCCGAGCGTCGAGCGCGTCTACTATCCCGGCCTGCCAAGCCACCCGCAGTACGCGCTGGCGCAGCGGCAGATGCGCC
ACCCCGGCGGCATCATCTCCTGCGTGCTGCGCGGCGATGCCGAACAGGTCGCTCAGCGCATCGGGCGGCTGCGTTTGTTT
ACCCTGGCCGAGAGCCTGGGCGGCGTGGAGAGCCTGGTCTGTCAGCCCTTCAGCATGACCCACGCCTCGATCCCGCTGAC
GCAGCGGCTGGCGCGCGGCATCGCTCCCCAGCTCATCCGCCTGTCGGTCGGCATCGAAGATGTCGCCGATCTGCAGGCAG
ACCTCGCACAGGCGCTCGACTGA

Protein sequence :
MRQFATQSVHSGSHDDAYGAVMPPIYATSTFAQRAPGEHRGFEYARSGNPTRQALEQAIAELEGGRQGYAFASGLAAIAT
VLELLDSGSHIIALDDVYGGTWRLLECVRSRSAGLQVSWVSPDDLAGIEAAIRPQTKMIWVETPTNPLLKLADLRAIAAL
AQRHDLLCVADNTFASPALQRPLESGFDIVVHSATKYLNGHSDVLAGLAVVGDNPPLAERLAYLHNALGAVLDPFSSFLT
LRGIRTLALRMERHSTNASALAQWLAQHPSVERVYYPGLPSHPQYALAQRQMRHPGGIISCVLRGDAEQVAQRIGRLRLF
TLAESLGGVESLVCQPFSMTHASIPLTQRLARGIAPQLIRLSVGIEDVADLQADLAQALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-74 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-75 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-55 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003295977.1 cystathionine gamma-synthase BAC0207 Protein 3e-60 44