Gene Information

Name : ETAE_1542 (ETAE_1542)
Accession : YP_003295594.1
Strain : Edwardsiella tarda EIB202
Genome accession: NC_013508
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1649782 - 1650180 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCAGCAACAACGCAATGCCGCACTGGTCTGCGCCCTGAGCGAATGGATCGAGCGACACCTGGGGCGCGATATCTA
CCTGGATGAGCTGGCGCGCTATTCAGGCTATTCGCTATGGCATATGCAAAAGATCTTCCGAGAAACCACCGGTATGTCGC
TGGGGCGCTATATTCGCCTGCGCAAACTCACCGGCGCCGCCCGGCGCCTGCGTCACAGCGATGAGGGGATCATCGATATC
GCGCTGTGCTATGGCTTTGCCTCTCAGTCCCACTTTACCTATATGTTTCGTAAACACTTTGGTATGACGCCGACCCGCTA
CCGTCTGCAGGCCGAGCAGCCCACGACGCCAGCGCCGGCGCTACATCACCAGTATGCCGCCGCGGCGCAAAGCGCCTGA

Protein sequence : 
MTQQQRNAALVCALSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRLRKLTGAARRLRHSDEGIIDI
ALCYGFASQSHFTYMFRKHFGMTPTRYRLQAEQPTTPAPALHHQYAAAAQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 4e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 1e-19 46
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 2e-16 42
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 1e-16 42
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 1e-16 41
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator BAC0371 Protein 3e-16 41
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 3e-16 41
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 5e-16 41
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 7e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAE_1542 YP_003295594.1 AraC family transcriptional regulator VFG0585 Protein 1e-16 42