Gene Information

Name : FI9785_128 (FI9785_128)
Accession : YP_003292283.1
Strain : Lactobacillus johnsonii FI9785
Genome accession: NC_013504
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 74921 - 75400 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAATATAAAAATTGTCTGTGTAGGGAAATTAAAGGAAAAGTACTTTAAAGATGGAATTGCAGAATATGTAAAGAGAAT
GAGTCGTTTTGCAAAAGTAAAAATAGTTCAAGTTCCAGATGAAAAAGCCCCCGAAAAACTAAGTCCTGCTGAAATGGAAC
AGGTCAAAGAAATCGAGGGAAAAAGAATTTTAGATAAGATAAAAGATAAAGAATATGTTTATGTAACTGCAATTAAGGGG
AAAGAAAGAACTAGCGAGGCTTTTGCGAAAGAGCTATCGAATTTAACTACTTATGGGCATTCTGACATTACCTTTGTTAT
TGGAGGAAGTCTCGGTACAAGTGACGCGGTAAATAAGCGAGCAGATGATTTAATCAGTTTTGGTAAATTTACAATGCCTC
ATCAATTAATGCGCTTGGTTTTAATTGAACAAATTTACCGTGCATTTATGATTAATAGCGGCAGTCCATACCATAAATAA

Protein sequence :
MNIKIVCVGKLKEKYFKDGIAEYVKRMSRFAKVKIVQVPDEKAPEKLSPAEMEQVKEIEGKRILDKIKDKEYVYVTAIKG
KERTSEAFAKELSNLTTYGHSDITFVIGGSLGTSDAVNKRADDLISFGKFTMPHQLMRLVLIEQIYRAFMINSGSPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-37 56
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-37 56
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-37 56
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-37 56
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-37 56
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-37 56
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-37 56
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-37 56
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-37 56
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-37 56
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-38 56
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-37 56
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-38 56
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-37 56
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-37 56
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-37 55
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 6e-37 55
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 4e-21 54
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-33 54