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Name : lysS (FI9785_348) Accession : YP_003292498.1 Strain : Lactobacillus johnsonii FI9785 Genome accession: NC_013504 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 301304 - 302848 bp Length : 1545 bp Strand : + Note : - DNA sequence : GTGGCAAAGAATGAAATGAACGACCAACTAATCGCTCGTCGTGAAAAAATGGACGAAATGCGTGAAAACGGTATTGAACC TTTTGGCGTAAGAAAATTTGATCGTCAAGACTTAGCTCGTACTTTGAATGAAAAGTATAGTAATGAAGATAAAGATGAAT TAAATGCTGATATGCCTATGACTAAAATTGCAGGTCGTATGCTTGCAAAACGGGGTAAAGGTAAAGTTGGATTTGCAGAT CTTTATGACCGTACTGGTAAAATTCAAATTTACGTACGTAAAGATATCGTTGGTGAAGATAACTACAAGATTTTTAAGAA GTCTGATATTGGTGACTTTTTAGGTATTGATGGTGAAGTAATGAAGACCGATACTGGTGAGTTGACTATTCGTGCTACTC ACATTACTTTCTTGTCTAAGGCTCTTCGCCCATTACCTAATAAATGGGATGGTTTAAAGGATGTTGAACAAATTTATCGT CAGCGCTACCTTGACTTAATTACAAATCATGATAGTTACATGCGTTTTGTTCACCGTACTCAAATTATTCAAGCTATTCG TGATTATTTAAATAATAGAGATTTCTTAGAAGTTGAAACTCCAGTTCTCCACAATATTCCTGGTGGTGCTGAAGCCCGTC CATTTATTACTCACCACAATGCTTTGGATATTGATCTTTACATGAGAATTGCTTTGGAACTTCCATTGAAGCGTTTAATT GTTGGTGGTATGGAACGTGTTTATGAAATCGGCCGTGTATTTAGAAATGAAGGTCTTGATACTAAGCACAACCCAGAATT TACTGAACTTGAAACTTATGCAGCTTACTGGGACTTCCATGATGTAATGGATGAAGCAGAAGGAATTATTAGAGCAGCTG CTAAAGTTGTTTCACCAGATGGTAAGATTACTTACCAAGGAACTGATATTGACTTAGGTAAGCCATTCCGCCGTGTTCAC ATGGTTGATTTAATCAAGGAAAAGACTGGTGTTGACTTCTGGAAGCCAATGACTATTGAAGAAGCAAGAAAAGTTGCTGA TGAACACAACGTTCACTATGAAAGCTACTGGAAGGTTGGTCACATTATTAATGCCTTCTTTGAAGAATTCGGTGAAGGAT CAATTGTTCAACCTACTTTTGTTTATGGACACCCAGTAGAAGTATCACCACTTGCTAAGAAGAATGCTGATGATCCAAGA TTTACCGATCGGTTTGAAATCTTCATTATGGGTGCTGAATATGGTAATGCATTCTCAGAATTAAATGATCCAGATGATCA ACGTCATCGTTTCGAAGACCAAATGGCTGAAAGAGAAGCTGGTAATGATGAAGCTGATATGATTGATGAAGATTACCTTC GTGCTATGGAATTCGGTATGCCTCCTACAGGTGGTTTAGGGATTGGTATTGATCGTTTGGTAATGCTTTTAACTGATGCT CCTGCTATTCGTGATGTCTTACTCTTCCCAACAATGCGCCCTGAAAAGGTGGAAAGTGTTGAAGCTGAAGTTCAAGAAGA TTTGAAGAATAAAAAGAATAAATAA Protein sequence : MAKNEMNDQLIARREKMDEMRENGIEPFGVRKFDRQDLARTLNEKYSNEDKDELNADMPMTKIAGRMLAKRGKGKVGFAD LYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEVMKTDTGELTIRATHITFLSKALRPLPNKWDGLKDVEQIYR QRYLDLITNHDSYMRFVHRTQIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI VGGMERVYEIGRVFRNEGLDTKHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVH MVDLIKEKTGVDFWKPMTIEEARKVADEHNVHYESYWKVGHIINAFFEEFGEGSIVQPTFVYGHPVEVSPLAKKNADDPR FTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQMAEREAGNDEADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDA PAIRDVLLFPTMRPEKVESVEAEVQEDLKNKKNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-109 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003292498.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-109 | 47 |
