Gene Information

Name : FI9785_1685 (FI9785_1685)
Accession : YP_003293805.1
Strain : Lactobacillus johnsonii FI9785
Genome accession: NC_013504
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1620613 - 1621293 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAGTAATTGAATTAAAAAATGTAAGCAAATCATATGGCCAAGGAAGTGCCAAAGTTGATGCCCTTAAAGATGTTGA
CTTTGAAGCTCAAAAAGGAGAGGTAGTTCTAATAGAAGGTCCTTCTGGTGCTGGTAAGAGTACATTTTTAACTATCGCCG
GAGCTTTGCAAAAGCCTACTTCTGGTGAAGTATTTATTGGAGGAGATAACGTAACTAACTATTCTCCTAAACAAGCTGAT
GCACTACGTCTAGATAAAATCGGCTTTGTCTTACAGGCTTATAATTTAGTTCCTTATTTGACTGTTAGGGAACAATTTAT
CTTAGTAGATAAGGTTAAAAAGAGCGGCAATCTAAGTAAAGAAGCGCTTGATGGATTGCTAGATGAATTAGGAATTTCTC
AACTGGTAAATAAATATCCTAAGGAATTGTCAGGTGGTCAGCAGCAAAGAGTTGCCATTGCAAGAGCTTTATATGCGGAT
CCAGCAATTATTTTGGCAGATGAGCCCACTGCTTCCTTAGACAGTGAAAAAGTTGAAGAAGTAGGGAAACTATTTAAGTC
TTTAGCTAAGCAAAAAGAAAAAGCAATTATTTTAGTTACTCATGACTTAAGGCTTAATAAGTATTCGGATAAGATTTATG
AAATGTTAGATGGACGTTTGAGCTTGAAAAAAGATAATTAA

Protein sequence : 
MSVIELKNVSKSYGQGSAKVDALKDVDFEAQKGEVVLIEGPSGAGKSTFLTIAGALQKPTSGEVFIGGDNVTNYSPKQAD
ALRLDKIGFVLQAYNLVPYLTVREQFILVDKVKKSGNLSKEALDGLLDELGISQLVNKYPKELSGGQQQRVAIARALYAD
PAIILADEPTASLDSEKVEEVGKLFKSLAKQKEKAIILVTHDLRLNKYSDKIYEMLDGRLSLKKDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 8e-50 50
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-43 49
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FI9785_1685 YP_003293805.1 ABC transporter ATPase CP001581.1.gene798.p Protein 2e-36 44