Gene Information

Name : FI9785_1624 (FI9785_1624)
Accession : YP_003293744.1
Strain : Lactobacillus johnsonii FI9785
Genome accession: NC_013504
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1561118 - 1561864 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAAGTAGTTCAAGTTCAAAATATTACTAAGACTTATGGTAAAAAAGGTGAAAAACAATACCAAGCTTTAAAGGG
CGCTAGCTTTGATGTGGAACGTGGTGAATTTGTTGGAATCATGGGTGCATCTGGTTCTGGTAAAACCACTTTGTTAAATA
TTTTATCTACATTAGATCAACCTACAACTGGAAATGTATACATTAATGGTCGCGATATTACTGGCTTAAATAAAAATCAA
ATGGCAGACTTCCGCGGTCAAGAAATTGGATTTATTTTTCAAGATTTTAACCTATTAGAAAATCTAACAAATCGTGAAAA
TATTGCTCTTCCTCTTTCACTTCAAAATGTAAAGAGCAGTCAGATTAATCCTAAAGTGGATAAAATTGCTAAGCGACTAG
GAATTGATCATATTTTAAATAAATATCCAGCAGAAATCTCTGGTGGACAAAAACAACGTGTTGCAGCAGCGCGTGCATTA
GTTCATGAACCAGCTATTCTTTATGGGGATGAACCAACTGGGGCACTTGATTCAAAGAGTGCTACTGAATTACTTGAAAC
AATGAAAGGTCTAAATGAAAATGATAGAGTTTCTATTTTAATGGTTACTCACGATCCATATTCCGCTTCATATGCTAGTC
GAATTCTTTTCATTAAAGATGGTAAGATCGGAAAAGAAATTAAAAAAGGTGGTAAAAGTAGAGAAGAATTTTATCAAGAA
ATTATTGCTGAATTAGGTAGACGTTAA

Protein sequence : 
MSEVVQVQNITKTYGKKGEKQYQALKGASFDVERGEFVGIMGASGSGKTTLLNILSTLDQPTTGNVYINGRDITGLNKNQ
MADFRGQEIGFIFQDFNLLENLTNRENIALPLSLQNVKSSQINPKVDKIAKRLGIDHILNKYPAEISGGQKQRVAAARAL
VHEPAILYGDEPTGALDSKSATELLETMKGLNENDRVSILMVTHDPYSASYASRILFIKDGKIGKEIKKGGKSREEFYQE
IIAELGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FI9785_1624 YP_003293744.1 ABC transporter ATPase NC_012469.1.7686878. Protein 2e-43 43
FI9785_1624 YP_003293744.1 ABC transporter ATPase CP001581.1.gene598.p Protein 2e-37 42
FI9785_1624 YP_003293744.1 ABC transporter ATPase NC_008702.1.4606598. Protein 8e-35 42
FI9785_1624 YP_003293744.1 ABC transporter ATPase CP001581.1.gene798.p Protein 5e-36 41