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Name : clpE (FI9785_1389) Accession : YP_003293516.1 Strain : Lactobacillus johnsonii FI9785 Genome accession: NC_013504 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1313672 - 1315840 bp Length : 2169 bp Strand : + Note : - DNA sequence : ATGTTATGCGATAACTGTCACGAACGTCCTGCCTCTATTCATCTTTATACAAATGTAAATGGGCAAGATCGTGAAATCTC ATTATGTCAACAATGTTATCAAGAATTGAAAAATCAACAAGGACAAAATAATAGTATGAATAATAACAATGCATTTTTTG GCGATTTTGATGATTTATTCAACGCCTTAAATAATAACAACAATGAACAAAATAATCCTCAAGGACGTGACCCACGCATG CAAATGGGTGGTGGCCGCAGAGGTGGAAACAATGGTGGTCAAAAATCCCTACTCGACCAGTATGGTACAGATTTAACCGA CTTAGCAAAAAAAGGTAAGATTGATCCAGTTATTGGTCGTGATAAAGAAATTGCTCGCGTTATTGAAATTTTAAATAGAC GGACTAAAAATAATCCTGTTCTTATCGGAGAAGCCGGTGTTGGTAAAACTGCTGTTGTTGAAGGCTTAGCACAACAAATT GTCGACGGTTCAGTTCCAGCTAAGCTTCAAGATAAAAGAATCATTTCTTTAAATATGGTATCAATGGTTCAAGGAACTGG AATTCGCGGTCAATTTGAACAAAGAATGCAGCAACTAATCAAAGAATTAGAACAAAATGATAATATCATCCTATTTATTG ATGAAATTCATGAATTAGTTGGTGCTGGCAACGCTGAAGGTGGTATGGATGCTGGTAACATTATTAAGCCAGCCTTAGCT CGTGGAGATTTCCAACTAATTGGTGCTACTACTATTAAGGAATATCGAAACATCGAAAAGGATTCTGCCCTTGCTCGTCG ATTTCAACCAGTGGAGGTTAAAGAACCTACAACTGAAGAAACAATTAAGATTTTGCAAGGCATTCGTAAGCGTTACGAAG ATTACCACCATGTTCACTATACTGACGAATCTATACGAGCTGCAGTAGATCTTTCTTCACGTTACATTCAAGATCGTTTC TTACCTGATAAAGCTATCGATCTTTTAGATGAAGCTGGTTCAAGAATGAATCTCACTATTCCTTATGTTGATAGTGAAAA AATCAAAGAAAGACTAGATGCTGCTGAAAGCTTAAAGCAAGATGCTTTAAAAAATGAGGATTACGAAAAAGCTGCCTACT ATCGTGATCAGATTGAAAAGTATGAAAAATTAAAAGATCAAAAAGTAGATCCTGATCAAACACCTAAAATCACTGAAAAG ATCATGAATAAGATCGTTGAGGAAAAAACTAATATTCCAGTTGGTGACTTACAAAAACAAGAAGAAACTCAATTAAAGAA TTTAGCTACTGACCTTAAAGATAATGTAATTGGTCAAAACAAAGCCGTTGAAACTGTTGCTCGGGCAATAAGACGAAATC GAGTTGGATTTAACAAATCTGGTCGTCCAATAGGCTCATTCTTATTTGTAGGACCTACTGGTGTAGGTAAAACGGAATTA GCTAAACAATTAGCCAAGCAAATCTTTGGTACAGAAGATGCAATGATTCGATTTGATATGAGCGAATATATGGAACAATA CTCTGTGTCTAAGCTAATCGGATCTGCACCAGGTTATGTAGGTTATGAAGAAGCCGGTCAATTAACAGAAAGGGTACGCC ATAATCCATATAGCTTAATTTTATTTGATGAAATTGAAAAAGCTCATCCTGATGTACTCCACCTATTCTTGCAAATTCTC GATGATGGCCGTTTAACTGATTCGCAAGGTCGCACAGTTTCCTTTAAAGATACCATCATCATTATGACTTCTAATGCTGG TCAAGGAATCAAAGAAGCTAGCGTAGGTTTTGCAGCTGAAAACAGTCATCAAGAACAATTTAAGAATAGCTTAGGTCAAT ACTTTAAACCTGAATTCTTAAATAGACTTGATGATATAGTTGAATTTAATGCACTTGATAAGAAAGATTTAATCAAGATT GTTGATTTAATGCTTGCAAATACCAATGATATGGTAAAAGATCAAGGTCTACATATTGATGTTACACCTGAAGCAAAAGA ACTTCTTGTCGAAAAAGGTTATGATCCTTCTATGGGCGCTCGTCCACTTCGTCGTACAATCCAAGAAGAAATTGAAGATA AGGTAGCCGATTATAAACTTGATAATCCAGCTGCTAAAGATCTAAAGGCTAATGTAGTTGACGGTAAAATAGTAATTAGT GAAAATTAA Protein sequence : MLCDNCHERPASIHLYTNVNGQDREISLCQQCYQELKNQQGQNNSMNNNNAFFGDFDDLFNALNNNNNEQNNPQGRDPRM QMGGGRRGGNNGGQKSLLDQYGTDLTDLAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQQI VDGSVPAKLQDKRIISLNMVSMVQGTGIRGQFEQRMQQLIKELEQNDNIILFIDEIHELVGAGNAEGGMDAGNIIKPALA RGDFQLIGATTIKEYRNIEKDSALARRFQPVEVKEPTTEETIKILQGIRKRYEDYHHVHYTDESIRAAVDLSSRYIQDRF LPDKAIDLLDEAGSRMNLTIPYVDSEKIKERLDAAESLKQDALKNEDYEKAAYYRDQIEKYEKLKDQKVDPDQTPKITEK IMNKIVEEKTNIPVGDLQKQEETQLKNLATDLKDNVIGQNKAVETVARAIRRNRVGFNKSGRPIGSFLFVGPTGVGKTEL AKQLAKQIFGTEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILFDEIEKAHPDVLHLFLQIL DDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKEASVGFAAENSHQEQFKNSLGQYFKPEFLNRLDDIVEFNALDKKDLIKI VDLMLANTNDMVKDQGLHIDVTPEAKELLVEKGYDPSMGARPLRRTIQEEIEDKVADYKLDNPAAKDLKANVVDGKIVIS EN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-147 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003293516.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 58 |
| clpE | YP_003293516.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 8e-152 | 52 |
