Gene Information

Name : smpB (FI9785_1330)
Accession : YP_003293457.1
Strain : Lactobacillus johnsonii FI9785
Genome accession: NC_013504
Putative virulence/resistance : Unknown
Product : SsrA-binding protein SmpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1248745 - 1249200 bp
Length : 456 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAAAAAGCAGATAATTTGATTGCTCAAAATAAAAAAGCAAGTCATGATTATTTTATTAAAGAAACTCTTGAAGC
CGGAATTGCGTTAACTGGAACGGAGATTAAATCAATTCGTGCACGTAGAATTAATTTACGGGATGGATATGTTCAAATTA
TTAATGGATCTGCTTTTTTAGAAAATGTTCATATTAGTGAATATAAAGAAGGTAATCGCTATAATCATGATCCTCTACGA
TCACGGCGCTTGTTGCTTCATAAAAAGGAAATTGTTCGCTTAGCTGGAATTCAAGCTCAACAAGGAATGGCTATTATTCC
TTTAAAAGTCTACTTAAAACATGGATTTGCTAAAGTTTTAATTGGTGTGGGACAAGGTAAGAAGCAATATGATAAACGTC
AAACTATTAAAAAGCGTGATCAAGACCGTGAAATTCATCGTAAGTATGGGATTTAG

Protein sequence :
MKQKADNLIAQNKKASHDYFIKETLEAGIALTGTEIKSIRARRINLRDGYVQIINGSAFLENVHISEYKEGNRYNHDPLR
SRRLLLHKKEIVRLAGIQAQQGMAIIPLKVYLKHGFAKVLIGVGQGKKQYDKRQTIKKRDQDREIHRKYGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-37 58
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 6e-26 43