Gene Information

Name : Rmar_0833 (Rmar_0833)
Accession : YP_003290118.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 952963 - 954402 bp
Length : 1440 bp
Strand : +
Note : KEGG: glo:Glov_1613 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGACACGCCGCACGAAGATCGTCTGTACGCTGGGACCGGCCTCGTCGGATCGCGAGACCATCCGAAAGCTCATCGAGGC
CGGCATGGATGTGGCCCGGTTGAATTTTTCGCACGGCAACCATGAGGAGCATCGCCGCCGCATCGAAATCGTCCGGGAGG
AGGCACGGAAGCTCGGGCGCGATGTGGCCATCCTGCAGGATCTGCAGGGCCCTAAGATCCGCCTCGGTGAAGTGGCCGAG
GGCGGCATTCTGATTCACGAGGGGCAGCGGCTGGTCCTGACGGCCCATCCCGAGCGGGCCGACGGACAGACCCGCATCTT
CGTGAACTATCCCACGCTGGCGCAGGACGTGGAGCCCGGCGGCCGCATTCTGCTCGACGACGGCCTGCTGGAATTGAAAA
TCGTGGACGTGGAAGGCGAGGACGTGATTACGGAGGTGGTGGTCGGCGGGCCGCTTCGCTCGCGCAAAGGCGTCAACCTG
CCCCACCTGCGCAACTCCACGCCGTCGCTTACCGAAAAGGACCTGCGCGATCTGGAGTTCGGCCTGCAGATGGAAGTGGA
CCTGATCGCGCTTTCGTTCGTGCGAAGCGAAACAGACGTGGCCGATCTGATGCGCCGCGTGCGGGACTCCGGCAAGGAAG
TGCGCGTGATCGCCAAGATCGAAAAGCCGGAGGCGGTGGCCAAGATCGATCAGATTCTGGCGCAGGCCGACGGGATCATG
GTGGCGCGCGGTGATCTGGGCATCGAAATGCCGCTGGCCGAGGTGCCGGCCGTGCAGAAACGCATCATCCGGAAGTGTCT
GGCCGCGGCCAAGCCGGTCATCACGGCCACGCAGATGCTCGAAAGCATGATCGAGAACCCGCGGCCCACGCGTGCCGAGG
CCAGCGACGTGGCCAATGCGGTGCTGGACGGCAGCGACGCGCTGATGCTCTCGGGCGAGACGGCCACCGGTAAATATCCG
GTGCGTGTGGTGCAGGTGATGGACGAGATCATCCGGCAGGCCGAACGCTTCCGGCGCGAGATTCGCGAAAGTCGGGGCCA
CTGGCTGCACATCCCGAAGGGCGCCGACGAGGCCGAGTCGGTTACCGAAGCCATCGGCTATACGGCCTGCCAGCTTGCCG
AGCAGGTGGGCGCCGTGGCGATCGCCTGCCTGACGGCCACGGGCAGCACGGCCCGCATGATCGCCCGCCATCGGCCGCCC
GTTCCGGTCTATGCCTTCACCGACAACCCTCGCATTGTCCCGCAGCTCAGCCTGCTCTGGGGCACGCGCGCCTTTTCGAT
TCCCTTTCAGCGCGACACGGACCAGGGCGTGCAACTGGTGCACCGGATTCTGAAAGAACAGGGGCTGGTCAGGCCGGGCG
ATCTGGTGGTCATCACGGCCGGAATGCCGCTGCCGGCCAAAGGACGCACCAACATGGTGCACGTCAGCCGAATCGAGTAG

Protein sequence :
MTRRTKIVCTLGPASSDRETIRKLIEAGMDVARLNFSHGNHEEHRRRIEIVREEARKLGRDVAILQDLQGPKIRLGEVAE
GGILIHEGQRLVLTAHPERADGQTRIFVNYPTLAQDVEPGGRILLDDGLLELKIVDVEGEDVITEVVVGGPLRSRKGVNL
PHLRNSTPSLTEKDLRDLEFGLQMEVDLIALSFVRSETDVADLMRRVRDSGKEVRVIAKIEKPEAVAKIDQILAQADGIM
VARGDLGIEMPLAEVPAVQKRIIRKCLAAAKPVITATQMLESMIENPRPTRAEASDVANAVLDGSDALMLSGETATGKYP
VRVVQVMDEIIRQAERFRREIRESRGHWLHIPKGADEAESVTEAIGYTACQLAEQVGAVAIACLTATGSTARMIARHRPP
VPVYAFTDNPRIVPQLSLLWGTRAFSIPFQRDTDQGVQLVHRILKEQGLVRPGDLVVITAGMPLPAKGRTNMVHVSRIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-68 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-68 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-68 41
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_0833 YP_003290118.1 pyruvate kinase VFG0479 Protein 5e-69 41