Gene Information

Name : Rmar_0605 (Rmar_0605)
Accession : YP_003289893.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 685012 - 686034 bp
Length : 1023 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein

DNA sequence : 
ATGAGGATGCCTCCGCTCACGCTGAGCTGCTGGCTGCTCGGGCTGCTGCTCGCCTCGGTGGTGGCCGGGGTTGCGCTCGG
AAGCGTCTCGCTGGCGCCGGACGTGGTGGTGCGCGTGCTGCTCGGGCGGATCACCGGCGCGGCGGTCGATCCGGTGGCCG
AACGGATCGTCTGGCAACTCCGGCTGCCCCGCGTGCTGATGGCCCTGCTGACCGGCGGAGGCCTGGCCATCGTGGGCGTG
GCCATGCAGACCCTGGTGCGCAATCCGCTGGCCGAGCCCTACATTCTGGGACTTTCGAGCGGGGCCAGCGCCGGCGCTTC
GCTGTTCTACCTGGGCTTTCTTCCACCGCTGCTATCGCGCACGCTCTCGATGCCGCTGGCGGCTTTTCTGGGCGCCCTGC
TGGCGCTGACGCTCGTCTATCTTGTGGCGCGACAGAACGGCGTGCTTTCGGTCACGCGGCTGCTGCTGGGCGGCGTGGCG
ATCTCGGCGCTCATGGCTTCGATCACGTCGTTCGTCACGTTCGCCTCGCCCAGTCCCGACAAGCTCCGCGCCGTGCTGTT
CTGGCTGCTGGGTTCGTTCAGCGGGGCCCGCTGGTCGCTGCTGCCGCTGCCCGCTCTGGCCACGCTGCTGGGGCTGCTCG
GCATGCTGGCGCTCACGCGCCCCATGGATCTGCTGCTGCTGGGCGAGGAGCCAGCCGCCCAGCTCGGCATCCCCGTCGAA
CTGGCCAAGCGCCTGCTGATCCTGTTCGCGGCGCTGGTCACCGGGACGCTCGTGGCGTTTTCCGGAACGATCGGCTTCGT
CGGGCTGATCATTCCGCATGCCGTCCGCGCCCTGACGGGCGTGCCACACCGGCGGGTGGTACCGCTGAGCTTCCTGCTGG
GCGCTGCCTTTCTGATCTGGGCCGATCTGGTCGCCCGCCTGCTGCTTCCCGGCACCGAGCTACCGGTGGGTGTCGTCACC
GCCCTCTGCGGCGTGCCGTTCTTTCTGATGCTGCTACGCCGCAGCCATTACCGCTTCGGCTGA

Protein sequence : 
MRMPPLTLSCWLLGLLLASVVAGVALGSVSLAPDVVVRVLLGRITGAAVDPVAERIVWQLRLPRVLMALLTGGGLAIVGV
AMQTLVRNPLAEPYILGLSSGASAGASLFYLGFLPPLLSRTLSMPLAAFLGALLALTLVYLVARQNGVLSVTRLLLGGVA
ISALMASITSFVTFASPSPDKLRAVLFWLLGSFSGARWSLLPLPALATLLGLLGMLALTRPMDLLLLGEEPAAQLGIPVE
LAKRLLILFAALVTGTLVAFSGTIGFVGLIIPHAVRALTGVPHRRVVPLSFLLGAAFLIWADLVARLLLPGTELPVGVVT
ALCGVPFFLMLLRRSHYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_0605 YP_003289893.1 transport system permease BAC0163 Protein 7e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_0605 YP_003289893.1 transport system permease VFG1043 Protein 7e-20 41