Gene Information

Name : Rmar_0541 (Rmar_0541)
Accession : YP_003289830.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 613983 - 614684 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_A1385 ABC transporter related

DNA sequence : 
ATGTTACAGGTTGCGCATCTGACGAAGACGTACCGGAGCGGCACCCGGACGCTGACGGTACTCCAGGATGTCTCGTTTTC
GGTGGCCGAAGGGGAAATCTGTGCGGTGGTCGGCCCTTCGGGCAGCGGTAAAACGACGCTGCTGGGGTTGTGTGCCGGAC
TGGATCTGCCCACGGCGGGCAAGGTGTGGCTGGACGGCCAGGACCTGACCGTACTCGACGAAGACGCCCGCGCGGCGCTT
CGCAACCGTTTGGTGGGCTTCGTTTTCCAGACTTTTCAGCTATTGCCGACGCTGACCGCGCTGGAGAACGTCATGGTACC
GGCCGAGCTGCGGGGCGACCGCACGGCTCGCCGACGGGCTATCGAACTGCTGGAGCGGGTGGGACTGGGCGACCGCCTGC
ATCACTATCCGCGCCAGCTCTCGGGCGGTGAGCAGCAACGGGTGGCGCTGGCACGGGCTTTCATCAACCGTCCCCGCATC
CTGTTCGCCGACGAGCCGACCGGCAACCTGGACGCCGAGACCGGGGCGGTCGTCGAGGATCTGCTTTTCGAACTGAACGC
GACGGCCGGCACCACGCTGGTCATCGTCACGCACAACCTGGAGCTGGCCCGACGCACCGGCCGCATCCTGCACCTGCGGG
CCGGACGCATCGTGGCCGACGAGCCGGTCCACGCCACCACCAGTGCGACACGTCATGGCTGA

Protein sequence : 
MLQVAHLTKTYRSGTRTLTVLQDVSFSVAEGEICAVVGPSGSGKTTLLGLCAGLDLPTAGKVWLDGQDLTVLDEDARAAL
RNRLVGFVFQTFQLLPTLTALENVMVPAELRGDRTARRRAIELLERVGLGDRLHHYPRQLSGGEQQRVALARAFINRPRI
LFADEPTGNLDAETGAVVEDLLFELNATAGTTLVIVTHNLELARRTGRILHLRAGRIVADEPVHATTSATRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_0541 YP_003289830.1 ABC transporter NC_008702.1.4606598. Protein 3e-32 47
Rmar_0541 YP_003289830.1 ABC transporter NC_012469.1.7686878. Protein 5e-42 44
Rmar_0541 YP_003289830.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 43