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Name : Rmar_0472 (Rmar_0472) Accession : YP_003289762.1 Strain : Rhodothermus marinus DSM 4252 Genome accession: NC_013501 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 518649 - 520697 bp Length : 2049 bp Strand : + Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: gbm:Gbem_1379 transketolase DNA sequence : ATGCAGGAACAGAAGGCGACGGAGGCGATTCGGGAAACCGACTTTTCGCCGGGTGAACTGGACAATCTGTGCATCAATAC GATTCGATTTCTGGCCGTCGATGCCGTCGAGCAGGCGAAGTCCGGCCATCCAGGCATGCCGATGGGCGCGGCGCCAATGG CCTACGTGCTCTGGACCCGGCATCTGCGGCACAATCCGCGCGATCCGAAGTGGCCGAACCGGGATCGGTTCGTGCTTTCG GCCGGTCATGGCTCGATGTTGCTCTACGCGCTGCTGCACCTGACCGGCTACGACCTGCCCATGGAGGAGTTGCAGCGCTT TCGTCAGTGGGGATCGCGCACGCCGGGCCATCCGGAATACGGGTTAACGCCCGGGGTCGAGACCACGACGGGACCGCTGG GCCAGGGCTTCGGAAATGCCGTCGGGATGGCGATCGCCGAGCAGTATCTGGCGGCGCATTTCAACCGGGACGGATTCCCG CTGTTCGACCATTTCACGTACGTGATCGCCTCCGACGGCGATCTGATGGAGGGCATCTCGCACGAGGCGGCTTCGCTGGC CGGACATCTCGGGCTGGGGAAGTTGATCGTGCTCTACGATGACAACGACATTTCCATCGACGGCTCGACGGACATCACCT TCACCGAGGACGTCGGCGCGCGCTTTGAGGCCTACGGCTGGCATGTGCAGCGCGTGGACGACGGGAACGACCTGGTAGCC ATCGATGCGGCGCTTCGGCAGGCCAAAGCCGAGACCGAACGCCCTTCGCTCATCATCGTGCGCACGCACATCGGCTACGG AAGCCCGAACAAGCAGGACACGCCCGCCGCGCACGGCGCGCCGCTCGGACCCGAAGAGGTGCGCCTGACCAAGCGCAACC TGGGCTGGCCCGAGGACAGGACCTTCTACGTGCCGGACGAAGTCTACCGGCACATGCGGCAGGCCGTCACGCGGGGGCAG CAGTGGCAGGCCGAATGGGAGGCGCTGCGCGCCCGCTATCGGGAGGCCTATCCCGCCGAAGCCGCTGAACTGGACCGCTG GCTGAGCCGGCGGTTGCCCGAAGGGTGGAGCGAGGGACTCCCGACCTTCGAGGCGGGCAAGGCCGTGGCCACGCGTAATG CCGGCGGCGCCGTGCTCGACGTACTGGCCGCCCGTATTCCCGAGCTGATCGGCGGCTCGGCCGACCTGGCCGAGTCGAAC AAGACGCATCCGAAAGGGCGCGAGGCCTTCAGCCGCGACAACCGCAAGGGCGGCTACATCCATTTCGGGGTGCGCGAGCA TGCCATGGCGGCCATCTGCAACGGGCTGTCGCTGCACGGACTGCGGGCCTACGCGAGCACCTTTCTGGTCTTCAGCGATT ATCTGCGGCCGTCGCTGCGGCTGAGCGCCCTCATGGAGCAGCCGGTCATCTACGTGTTCACGCACGACTCGATCGGGCTG GGCGAGGACGGGCCCACGCATCAGCCGATCGAGCATCTGGCCAGCCTGCGCGCCATCCCGCACGTGGTGGTGCTGCGGCC GGCCGACGCGACCGAGACGGTGGAAGCCTGGAAGGTGGCGCTCGAGCGCGAGGACGGTCCCACGGTGCTCGTACTGACAC GTCAGAACGTGCCGGTGCTGGACCGGAGCCGCCTGGCACCGGCCGATGGGGTGCGCCGTGGCGCTTACGTGCTCAAAGAA GCACAGGGCGCGCTGCAGGCGATCCTGCTGGCTTCGGGCAGTGAAGTGCATGTGGCGCTGGCGGCCGCCGAACAGCTCGA AGCCGAAGGCATCGGCACGCGCGTCGTCAGCGTGCCTTCCTGGGAGCTGTTCAAAAAGCAGGAGGCGGCCTATCGGGAAT CGGTACTCCCGCCGGAGGTGACCGTGCGGGTGGCCGTCGAAGCCGGGGTCGGACAGGGATGGGAGCAGTTCGTGGGGTGC CGGGGCCGCATCGTCAGCATCGAGCGCTTCGGCGCTTCGGCCCCCGGCAAGGTCCTGTTCGAAAAATTCGGCTTCACGCC CGAGCGGGTGGCCAGTGAAGTGCGTGCGCTGCTGGCGCAGAACCATTGA Protein sequence : MQEQKATEAIRETDFSPGELDNLCINTIRFLAVDAVEQAKSGHPGMPMGAAPMAYVLWTRHLRHNPRDPKWPNRDRFVLS AGHGSMLLYALLHLTGYDLPMEELQRFRQWGSRTPGHPEYGLTPGVETTTGPLGQGFGNAVGMAIAEQYLAAHFNRDGFP LFDHFTYVIASDGDLMEGISHEAASLAGHLGLGKLIVLYDDNDISIDGSTDITFTEDVGARFEAYGWHVQRVDDGNDLVA IDAALRQAKAETERPSLIIVRTHIGYGSPNKQDTPAAHGAPLGPEEVRLTKRNLGWPEDRTFYVPDEVYRHMRQAVTRGQ QWQAEWEALRARYREAYPAEAAELDRWLSRRLPEGWSEGLPTFEAGKAVATRNAGGAVLDVLAARIPELIGGSADLAESN KTHPKGREAFSRDNRKGGYIHFGVREHAMAAICNGLSLHGLRAYASTFLVFSDYLRPSLRLSALMEQPVIYVFTHDSIGL GEDGPTHQPIEHLASLRAIPHVVVLRPADATETVEAWKVALEREDGPTVLVLTRQNVPVLDRSRLAPADGVRRGAYVLKE AQGALQAILLASGSEVHVALAAAEQLEAEGIGTRVVSVPSWELFKKQEAAYRESVLPPEVTVRVAVEAGVGQGWEQFVGC RGRIVSIERFGASAPGKVLFEKFGFTPERVASEVRALLAQNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-147 | 52 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-145 | 51 |
