Gene Information

Name : Rmar_0470 (Rmar_0470)
Accession : YP_003289760.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 516218 - 516919 bp
Length : 702 bp
Strand : +
Note : PFAM: class II aldolase/adducin family protein; KEGG: esa:ESA_03278 L-ribulose-5-phosphate 4- epimerase

DNA sequence :
ATGGCGTTCGAAAAACTGAAGGCGGCGGTCTGGAAGACGAACCGGGACATCGTGCGGAGCGGGCTGGTGCAGCTCACCTG
GGGCAATGCCAGCGGGGTGGATCGCCAGGCCGGCGTCATGGCCATCAAACCCAGCGGCGTGGACTACGACCGACTGCGGC
CGGACGACATGGTGATCGTCGAACTGGAAACCGGCCGCGTGGTGGAGGGCACGCTGAAGCCCTCGACCGACACGCCCACG
CACCGCTACCTGTACCTGGCGTTCGAAGAAATCGGCGGCATCGTGCACACGCATTCCCGACATGCGGTGGCCTGGGCCCA
GGCGCGCCGACCGATCCCGTGCCTGGGGACGACCCATGCCGACCATTTCTACGGAGAGATTCCGGTTACGCGACCGTTGC
GGCCGGAAGAGGTCGCCGAAGCCTACGAGCACCAGACGGGCGTGGTGATCGCCGAGTGCTTCCGGGAGCGCGGGCTCGAT
CCGCTGGAGGTGCCCGGCGTGCTGGTGGCCGGGCATGGCCCTTTTGCCTGGGGTGAAACCCCGGAAAAAGCGGCCGAAAA
CGCGCTGGTGCTCGAACTGGTGGCCGAAATGGCCCTCTACACCTGTCAGCTCAATCCCGAAGCGCCCGTGCTCGAGCGGT
ACGTGCTGGACAAACACTTCCGGCGCAAGCACGGAAGCCAGGCTTACTACGGACAGCGATAG

Protein sequence :
MAFEKLKAAVWKTNRDIVRSGLVQLTWGNASGVDRQAGVMAIKPSGVDYDRLRPDDMVIVELETGRVVEGTLKPSTDTPT
HRYLYLAFEEIGGIVHTHSRHAVAWAQARRPIPCLGTTHADHFYGEIPVTRPLRPEEVAEAYEHQTGVVIAECFRERGLD
PLEVPGVLVAGHGPFAWGETPEKAAENALVLELVAEMALYTCQLNPEAPVLERYVLDKHFRRKHGSQAYYGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-49 55