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Name : Rmar_2278 (Rmar_2278) Accession : YP_003291545.1 Strain : Rhodothermus marinus DSM 4252 Genome accession: NC_013501 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2649780 - 2651081 bp Length : 1302 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vpa:VPA1704 putative integral membrane protein, transporter DNA sequence : ATGGAGTGGATCGCCGTCCTGATTCTGGTCGTCTCCTTTGCGGTGCTGTTGCTGCTGGGTGTGCCGATCGCGGTCTGCAT CGGGCTGGCCACGATCCTGACCATGCTGCCGAGCATGCCGCTGGCCCCGGCGCTGACCACCGAGGCGCAGCGCATCGCCA CCGGACTCGATTCGTTCACGCTGCTGGCCATTCCGTTTTTCATTCTGGCGGGGCATCTGATGAACCGGGGCGGCATTGCC CGGCGACTGGTGAACTTCGCCGAAGCGGCGCTGGGTATGCTGCCGGGGGCGCTGGCGCACGTGAACATCCTGGCGGCCAT GCTCTTCGGAGCGATCTCGGGTTCGGCGGCGGCCGCCGCCTCGGCCATCGGCAGCATCATGGCGCCGCACATGGAGCGCG AGGGATATGACAAGGGCTACAGTGTGGCGGTCAACGTCACCTCGGCCACCACCGGCCTGCTCATTCCACCCAGCAACATC CTGATCGTCTATTCGCTGGCCTCGGGCGGTACGTCGATCGCCGCGCTGTTTCTGGCGGGCTACATCCCGGGCATTCTTGT CGGTCTGATGCTCATGCTGGTGGCCGGCTGGATCGCCTGGAAGCGGCGCTACCCGGTGGCCGGTCGGCCCAGCCTCCGCC GTCTATGGAGCACGTTCTGGGACGCTGCCCCCAGCCTGCTGCTGCTGGTGATCGTGATCGGCGGCATCATCGCGGGCATC TTCACAGCCACCGAGGCTGCCGCCGTGGCCGTGCTCTACGCGCTGATTCTGGCGCTGCTCTACCGCGAGTTGCGGCTGCG GGATCTACCCCGCGTGCTGCTCGAAGCTTCTTCCACGACCGCCATCGTGCTGCTGCTCATCGCCACCTCGATGGCCATGT CGTGGATCCTGGCCTACGAGCAGATTCCCCAGGGCGTCAGCCAGGCGCTGCTGGCCCTGACCGACAACAAGATCCTGATT CTGCTGATCATCAACTTCGTGCTGCTGGCCGTCGGGACGTTCATGGACATGACGCCCGCCGTGCTGATTTTCACCCCGAT CTTTCTGCCGGTGGCGCTGAACCTGGGCATCGATCCCATTCACTTCGGGATCATCCTGGTGCTCAATCTCTGCATCGGAC TCTGCACGCCGCCCGTGGGGACCGTGCTGTTCGTGGGACTGGGCGTGACGCAGACGCCCATGACGCGCGTGCTGCGCTCG CTCTTGCCCATGTACGCGGCGATGATCATCGCACTGCTGCTGGTGACGTACCTGCCGGAGCTGAGCCTCTGGCTGCCTCG TGTCTTTGGATACCTCGAATAA Protein sequence : MEWIAVLILVVSFAVLLLLGVPIAVCIGLATILTMLPSMPLAPALTTEAQRIATGLDSFTLLAIPFFILAGHLMNRGGIA RRLVNFAEAALGMLPGALAHVNILAAMLFGAISGSAAAAASAIGSIMAPHMEREGYDKGYSVAVNVTSATTGLLIPPSNI LIVYSLASGGTSIAALFLAGYIPGILVGLMLMLVAGWIAWKRRYPVAGRPSLRRLWSTFWDAAPSLLLLVIVIGGIIAGI FTATEAAAVAVLYALILALLYRELRLRDLPRVLLEASSTTAIVLLLIATSMAMSWILAYEQIPQGVSQALLALTDNKILI LLIINFVLLAVGTFMDMTPAVLIFTPIFLPVALNLGIDPIHFGIILVLNLCIGLCTPPVGTVLFVGLGVTQTPMTRVLRS LLPMYAAMIIALLLVTYLPELSLWLPRVFGYLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 6e-34 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-34 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-34 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rmar_2278 | YP_003291545.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-34 | 42 |
