Gene Information

Name : Rmar_2202 (Rmar_2202)
Accession : YP_003291469.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Unknown
Product : AMP-dependent synthetase and ligase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 2563228 - 2564805 bp
Length : 1578 bp
Strand : -
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: sil:SPO0801 4-coumarate:CoA ligase

DNA sequence :
ATGCATATCTACCGCAGCCCGTTTCCCGATGTGGAAATTCCGGAAATCCCGCTGCCGGAGATGGTTTTTCGGCGGGTGGA
CGAACATCCGGACAAGCCGGCGCTCATCGAAGGGCTGACCGGACACACGCTCACCTACGCGCAGCTCCGCGAGCAGGCGC
GCGCCTTTGCGGCCGGACTGGCCGCCCGGGGTTTCCGCAAGGGCGACTTGCTGGCCCTCTACAGTCCCAACCTGCCGGAG
TACGCCGTGGTCTTCTACGGGGTGGCGATGGCCGGTGGCATCACGACGACGGTCAACCCGCTCTACACGGTCGATGAACT
GGCGCACCAGCTGGAAGACGCCGGGGCGCGATTTCTGGTGACGTTCCCGCTGTTTCTGGAGAATGCGCGGGCGGCGGCCG
AACGCGCCGGTGTGGAGGAGGTGATCGTGATCGGCGAAGCCGACGGGGCCACGCCGCTGGCCGAACTGCTGCAGCACGGG
ACCGAACCGCCGGCCGTGGACATCAACCCGCGCGAAGACCTCGTCGTGCTGCCGTACTCGAGCGGCACCACGGGGCGTCC
CAAGGGCGTCATGCTCACGCACTACAACATCGTGGCGAACATCGCCCAGACGCTGGCCGTCGAGCAGTTTGAGGACGACG
AAGTGCTCATCGGCATTCTGCCGTTTTACCACATCTACGGCATGACGGTCATCATGAGCATGGCGCTGCATGCGGGGGCC
ACGGTGGTGACCATGCCGCGTTTCGATCTGGAGCAGTTTCTGGAATTGCTCCAGCGCTACCGGATCACCACGGCCTTTCT
GGTGCCGCCCATCATCCTGGCGCTGGCCAAACATCCGCTGGTGGACCGGTACGATCTCTCCAGCCTGCGCTACGTCAACT
CCGGTGCGGCCCCGCTGCCCGAGCCGGTGGCCCGCCAGTGCGCCGAGCGGCTGAACGTGACGGTGCGGCAGGGCTATGGC
ATGACCGAAACGAGTCCGGTGACGCACTTCACGCCCCGCGGCTTTCCGATTAAGCTCTCGTCGGTGGGCGTGGCCGTGCC
GAACACGGAATTCCGGATCGTCGATGTGGCCACGCACGAAGACGTGCCCGAGGGCGAAACGGGCGAGCTGTGGATCCGCG
GCCCGCAGGTCATGAAGGGCTACTGGAAGAATCTGCAGGCCACGCGCGACACGCTCGACGAGGAGGGCTGGCTGCACACG
GGCGACGTGGCCCGTGTGGACCAGGACGGCTACCTGTACATCGTCGATCGCGTCAAGGAGCTGATCAAGTACAAGGGCTA
TCAGGTGGCCCCGGCCGAGCTGGAGGAGATCCTGCAGGGGCATCCGGCCGTGGCCGACGTGGCCGTCGTGCCGAGCCCCG
ACGAAGAGGCGGGTGAGGTGCCCAAGGCCTACGTGGTGCTCAAGCCCGGCATGCAGGCCACGGCCGAAGAACTGATGGCC
TACGTGGCCGAGCGGGTGGCGCCGTACAAGAAGATCCGGCGCGTGGAATTCGTCGATCAGATTCCCAAGACGCTGTCGGG
TAAGATCCTGCGGCGGGAACTGGTCAAGCGCGAACGTGAGATTGCCGGATTGTCGTGA

Protein sequence :
MHIYRSPFPDVEIPEIPLPEMVFRRVDEHPDKPALIEGLTGHTLTYAQLREQARAFAAGLAARGFRKGDLLALYSPNLPE
YAVVFYGVAMAGGITTTVNPLYTVDELAHQLEDAGARFLVTFPLFLENARAAAERAGVEEVIVIGEADGATPLAELLQHG
TEPPAVDINPREDLVVLPYSSGTTGRPKGVMLTHYNIVANIAQTLAVEQFEDDEVLIGILPFYHIYGMTVIMSMALHAGA
TVVTMPRFDLEQFLELLQRYRITTAFLVPPIILALAKHPLVDRYDLSSLRYVNSGAAPLPEPVARQCAERLNVTVRQGYG
MTETSPVTHFTPRGFPIKLSSVGVAVPNTEFRIVDVATHEDVPEGETGELWIRGPQVMKGYWKNLQATRDTLDEEGWLHT
GDVARVDQDGYLYIVDRVKELIKYKGYQVAPAELEEILQGHPAVADVAVVPSPDEEAGEVPKAYVVLKPGMQATAEELMA
YVAERVAPYKKIRRVEFVDQIPKTLSGKILRRELVKREREIAGLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1475 YP_001800869.1 acyl-CoA synthetase Not tested Not named Protein 7e-90 46