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Name : Rmar_1968 (Rmar_1968) Accession : YP_003291239.1 Strain : Rhodothermus marinus DSM 4252 Genome accession: NC_013501 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2294689 - 2295969 bp Length : 1281 bp Strand : + Note : KEGG: bcy:Bcer98_0012 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTGGATCTGCAACGCATTCGCCAGGAGCCCGATCGTGTCCGTGAGGCCATTCGCACGAAAGGCATCGGCGATCCGGA ACTGGTCGATCGCGTGCTCGCCCTCGACGCCGAACATCGTCGGACGCTGACCGAGCTGCAGGAGGCGCGGCACCGACAGA ACACGCTTGCCCGCCAGATCGGCCAGCTCATGCGGGAAGGGCGTCGCGACGAAGCACAGGCCCTCATCGAAGAAAATACC CGGCTCAAGGAGCACATCAAGACGCTGGAAGCCCGCGAGCGCGAGCTCGGCGAAGCGCTCGAAGCGCTGCTGCTGGAGAT CCCCAACATCCCGCATCCCTCGGTGCCCGTCGGACGCGGCCCCGAGGACAACGTTGTGCTGCACGAGGAGGGCTGCCCGC CCGCGTTCGACTTCGAGCCGCTCCCCCACTGGGAGCTGGCCACGCGCCACGGGCTGATCGACTTCGAGCGCGGTGCCAAG GTTACCGGAAGCGGCTTTCCGTTCTACGTGGGCAAAGGGGCCCGGCTGCAACGCGCACTCGTTCAGTTCTTCCTGGACCT GGCCGTCAACGAAGGGGGCTATGTGGAAATCCAGCCGCCGCTGTTCGTAAACGCCGACAGCGCCCGCGGCACCGGCCAGC TTCCGGACAAGGAAGATCTGATGTATGTGATCGAGCGGGACGGCCTCTACCCGATTCCCACGGCCGAAGTGCCCGTCACG AACTACTACCGCGACGAAATTCTGGAAGAAAGCCGGCTCCCGATCAAGTTCTGCGCCTACTCGCCCTGCTTCCGACGCGA GGCCGGTTCCTACGGCAAGGACGTACGCGGACTGAACCGCCTGCATCAGTTCGACAAAGTGGAGCTGGTGCAATTCGTCC ATCCCGACACCAGCTACGACGCGCTGGAGCAGCTCCGCGAAGACGCCGAGCGCCCGCTTCGGCTGCTGGGCCTGCCCTAC CGCCGCGTGCTGATGTGCACGGCCGAGACGGGCTTCACCCAGGCGAAAAAGTACGACCTGGAGGTCTGGAGCGCGGGCCA GCAGCGCTGGCTGGAGGTGTCGTCCATCTCCAACTTCGAGGACTTCCAGGCGCGGCGGGCGCGCATTCGCTTCCGTCCAG CCGACGGCGGCAGGCCCCGCTTCGTGCACACGCTCAACGGCAGTGGTCTGGCACTGCCCCGCGTGGTGGCCGCCCTGCTG GAGCACTACCAGCAGGCGGATGGCTCCATCATAATCCCCGAAGTGCTTCGACCCTATACCGGCTTCGACCGGATCGGCTG A Protein sequence : MLDLQRIRQEPDRVREAIRTKGIGDPELVDRVLALDAEHRRTLTELQEARHRQNTLARQIGQLMREGRRDEAQALIEENT RLKEHIKTLEARERELGEALEALLLEIPNIPHPSVPVGRGPEDNVVLHEEGCPPAFDFEPLPHWELATRHGLIDFERGAK VTGSGFPFYVGKGARLQRALVQFFLDLAVNEGGYVEIQPPLFVNADSARGTGQLPDKEDLMYVIERDGLYPIPTAEVPVT NYYRDEILEESRLPIKFCAYSPCFRREAGSYGKDVRGLNRLHQFDKVELVQFVHPDTSYDALEQLREDAERPLRLLGLPY RRVLMCTAETGFTQAKKYDLEVWSAGQQRWLEVSSISNFEDFQARRARIRFRPADGGRPRFVHTLNGSGLALPRVVAALL EHYQQADGSIIIPEVLRPYTGFDRIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-79 | 48 |
