Gene Information

Name : Rmar_1609 (Rmar_1609)
Accession : YP_003290883.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1864954 - 1865913 bp
Length : 960 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: afw:Anae109_3008 hypothetical protein

DNA sequence :
ATGACTGAAACACCTCATCGTCTGCGCGTGGGCATCAGTAGTTGCCTGCTGGGCGAACCGGTACGCTTCAACGGTGGCCA
CGCCCGCGATCGCTCCCTGATCCAATTGCTCGGCCCTTTCGTCGAATGGGTGCCCATGTGCCCCGAAGTGGCCGTGGGGA
TGGGCGTTCCACGCGAAGCAGTGCGCCTGGTGGGCGACATCGAGCGCCCCCGACTGGTGGGATCAAACTCGGGCCGCGAC
TGGACCGACGCCATGCGCACCTGGAGCGAAGCCCAGGCCGAGCAGATTGCGCAAATGGATCTCGACGGCTTTATTCTGAA
AAGCCGCTCTCCCACCTGTGGCCTGTTTCGCGTGAAGGTGTACGATCAAAACGGAGTGCCCCGGAATGAAGGTCGCGGAC
TCTTCGCCGATGCACTGGCTCGCCGACTGCCCCTGCTTCCCATGGAAGAAGAGGGGCGCCTGCGCGATCCGCTTCTCCGC
GAAAACTTTGTCGATCGCCTGTTTGCCTACCACCGACTTCGCCAGCTGCTTCGATCCCGACCCGAACCCGCCGACCTGAT
CCGCTTCCACACGGCCCATAAACTGACGCTGCTTTCGCACAGCCCTGCACACCTTAAACAACTGGGTCAACTTGTGGCCC
GCGCCGGAAGCGGCGCTTTTCCTGAGATTCTGGAAAGCTATACCCGGTTGTTCATGGAGGCCATGAACCGTCCGGCCACT
CGCAAAAAGCACACAAACGTGCTGCAGCATCTGGCCGGTTACCTGCACGATCACCTTTCGGCCGAAGACCGCGCCGAGCT
TCGTTCGCTGATCGATGATTATCGACAGGGGATGGTGCCCCTGATTGCGCCGCTCATTCTGCTGCGCCACCACATCCGGC
GCGCTCCGGTTCATCCCTGGGTGAAGGTGCAGGTCTATCTGGAGCCCTACCCCAAAGAGCTCATGCTGCGCAATTTCTGA

Protein sequence :
MTETPHRLRVGISSCLLGEPVRFNGGHARDRSLIQLLGPFVEWVPMCPEVAVGMGVPREAVRLVGDIERPRLVGSNSGRD
WTDAMRTWSEAQAEQIAQMDLDGFILKSRSPTCGLFRVKVYDQNGVPRNEGRGLFADALARRLPLLPMEEEGRLRDPLLR
ENFVDRLFAYHRLRQLLRSRPEPADLIRFHTAHKLTLLSHSPAHLKQLGQLVARAGSGAFPEILESYTRLFMEAMNRPAT
RKKHTNVLQHLAGYLHDHLSAEDRAELRSLIDDYRQGMVPLIAPLILLRHHIRRAPVHPWVKVQVYLEPYPKELMLRNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-43 43
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 9e-44 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 9e-44 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-44 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_1609 YP_003290883.1 hypothetical protein VFG0490 Protein 4e-44 43