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Name : Rmar_1542 (Rmar_1542) Accession : YP_003290817.1 Strain : Rhodothermus marinus DSM 4252 Genome accession: NC_013501 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1798450 - 1801146 bp Length : 2697 bp Strand : - Note : KEGG: gme:Gmet_1424 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein DNA sequence : ATGGCTTCCAGGGAAGCGGAGAAACAGGTGGGGCAGACGCCGCTCATGCGGCAGTACTACAAGATCAAGTCCCGCTATCC GAACGCCATCCTGCTGTTTCGGATGGGGGACTTCTACGAGACCTTCGACGAAGACGCGCACATCGTCAGCCGCGTGCTGG GCATCACGCTGACGAAGCGGTCCAACGGCCAGGCGGCCGACGTGCCGCTGGCGGGCTTTCCGCACCACGCACTGGACAAC TACCTGCCGAAGCTGGTGCGGGCCGGCTACCGGGTGGCCATCTGCGAGCAACTCGAAGATCCCAAATTCGCCCGCAAGGT CGTCAAGCGCGACGTCGTCGAGGTCGTCACCCCGGGCGTCTCGTTCCACGAACACCTGCTCGATCCCAAACGGGCCAACT ACCTGGCCGCCGTGGTCTGGGGCACCGAACGAGGCGAGCGTGACCGTATCGGCTTTGCCTTTCTCGATGCCTCGACGGGC GAGTTTTCAGTGACGGAGGCGCCGGCCCATCGCCTGGAAGATCTGCTGCAGACGATCCAGCCGGCCGAGGTGCTCGTCGA TAAACGCCAGCGTGACCGGCTGCAGGGCGTGCGGGGCCTTTCGTTTGTCGTTACGCCCCAGGAAGACTGGGTCTTCAGCT TTGACTATGCCTACGAAGTGCTGCTCCGGCACTTCAAGACGCACTCGCTCAAGGGCTTTGGCGTCGATGACCTGCGGCTG GGACTCCAGGCGGCCGGAGCAGCCCTGCACTACCTGGGCGAGACGCAGAAGGGCCGGCTGCCCCACGTGCGTCGGCTGAC GCGCTACGTCACCGACGAATACATGGTGCTCGATCCGCAGACGAAGCGCAACCTGGAGCTGGTCGCCTCGCTGCAGGACG GTACGCAGGAAGGCTCGCTCGTACAGATCCTCGACGAGACGCTCACGCCGATGGGCGGGCGACTGCTCCGGCGCTGGCTG CTGCGGCCGCTCAAAAACGTGCGCCAGATCGAAAAGCGCCTGGATGCCGTCGAGGCGCTCGTGCGCGACCGCCGACTGCG CGAACGCCTGCGCGAAGAGCTGCGCCAGGTGGGCGACCTGGAGCGGCTGGCCGCCCGCGTCTGCACCGGACGTGCCACCC CGCGCGACCTGATGCACCTGCGGCTGACACTCGAGCAGATTCCCCCCATCAAGCAGGTGCTCGCCGACGTGTCCTGCGAC ACGCTGCGCCGCCTGGCCGAACAGCTCACGCTCTGTACGCAGGTGGTCGAGCGCATCCGCCAGGCGCTTGTCGATGATCC GCCGGCCTCGCTGAGCGACGGTGGCGTGATCCGCGACGGCTTCAGCGCCGAGCTGGATGAACTGCGCGAGATCGCCCGCT CCGGTAAGGACTTCATCGCTCGCCTGCAGCAGAAAGAGATCGAGCGCACGGGCATCCCGTCGCTCAAGGTGGGCTTCAAC AAGGTGTTCGGCTATTACATCGAAGTCACCAACGCCCACCGCAACAAAATCCCGCCGCATTACATCCGCAAGCAGACGCT GGTCAATGCCGAGCGCTACATCACGCCGGAGCTGAAAGAGTACGAGGAAAAAATTCTCTCGGCCGAGGAGAAGATCGCCA GCCTGGAGGCCGAGTTGTTCAACCGGTTGCGTCTGGAGGTGGCCGAGGCGACGGCCGAGCTGCAGCTCAACGCGTCGCTG CTGGCCATGCTCGATGTGTTCTGCAGCCTGGCCGAAGTGGCCGATCGTTACGGCTACACGCGACCGGAACTGCACGAGGG CACCGAGCTGCTCATCGAAGAAGGCCGCCATCCGGTGGTCGAGCGTACGCTACCGCCCGGCGAGCCGTTCATCCCGAACG ACATCTACCTCGACACGCACGCGCAGCAGATCCTGATCATCACGGGACCGAACATGGCCGGCAAGAGCGTGGTGCTGCGC CAGACCGGCCTGATCGTACTGCTGGCGCAGATCGGTTCGTTCGTGCCGGCCCGCCGCGCCCGCATCGGGATCGTCGATCG CATCTTCACGCGTGTGGGCGCTTCGGACAACCTGGCCGCCGGCGAGAGTACGTTTCTCGTCGAAATGAACGAGACGGCCA ACATTCTCAACAATGCCACGCCGCGCTCGCTGATCCTGCTCGACGAGGTGGGGCGGGGTACTTCGACGTTCGACGGGCTG TCGATCGCCTGGGCGCTTGTCGAGTACCTGCACGAGACGCCCTCGGTGGCCGCGCGCACGCTGTTCGCCACGCACTACCA CGAACTGAACGAACTGGCCGAACGCTTCCCGCGCGTGAAGAACTTCCGCGTGCAGGTCGAGGAGCACGACGGCCGGGTGA TCTTTCTGCACAAACTGGTGCCGGGCGGGGCCGACCATTCCTACGGCATCGAGGTGGCCCGCATGGCCGGATTGCCCGAG CCGGTCATTGCGCGCGCCCGTGAGATCCTGCGCCATCTGGAGGCGCAGCACCTTGTGGTCGAAGCACCGGCCGGCGACGG CGAGCCCGTGCGTCCCGTGCGGGCACGACGGGCCGAACGCATTCCCGCCGACACGTCGGCCTTCCAGCTTTCGCTCTTTG CGCAACCCGAGCCCGATCCGGTTGCCGAGGAGCTCAAAGAGCGGCTGCGCCGGATCGATCCCAACCGCATGACGCCCATC GAGGCCCTGCTCCTGCTCGACGAACTCAAGCGGCTTGTGGAACGCCATGATTCGTGA Protein sequence : MASREAEKQVGQTPLMRQYYKIKSRYPNAILLFRMGDFYETFDEDAHIVSRVLGITLTKRSNGQAADVPLAGFPHHALDN YLPKLVRAGYRVAICEQLEDPKFARKVVKRDVVEVVTPGVSFHEHLLDPKRANYLAAVVWGTERGERDRIGFAFLDASTG EFSVTEAPAHRLEDLLQTIQPAEVLVDKRQRDRLQGVRGLSFVVTPQEDWVFSFDYAYEVLLRHFKTHSLKGFGVDDLRL GLQAAGAALHYLGETQKGRLPHVRRLTRYVTDEYMVLDPQTKRNLELVASLQDGTQEGSLVQILDETLTPMGGRLLRRWL LRPLKNVRQIEKRLDAVEALVRDRRLRERLREELRQVGDLERLAARVCTGRATPRDLMHLRLTLEQIPPIKQVLADVSCD TLRRLAEQLTLCTQVVERIRQALVDDPPASLSDGGVIRDGFSAELDELREIARSGKDFIARLQQKEIERTGIPSLKVGFN KVFGYYIEVTNAHRNKIPPHYIRKQTLVNAERYITPELKEYEEKILSAEEKIASLEAELFNRLRLEVAEATAELQLNASL LAMLDVFCSLAEVADRYGYTRPELHEGTELLIEEGRHPVVERTLPPGEPFIPNDIYLDTHAQQILIITGPNMAGKSVVLR QTGLIVLLAQIGSFVPARRARIGIVDRIFTRVGASDNLAAGESTFLVEMNETANILNNATPRSLILLDEVGRGTSTFDGL SIAWALVEYLHETPSVAARTLFATHYHELNELAERFPRVKNFRVQVEEHDGRVIFLHKLVPGGADHSYGIEVARMAGLPE PVIARAREILRHLEAQHLVVEAPAGDGEPVRPVRARRAERIPADTSAFQLSLFAQPEPDPVAEELKERLRRIDPNRMTPI EALLLLDELKRLVERHDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 9e-128 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rmar_1542 | YP_003290817.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 6e-138 | 45 |
