Gene Information

Name : Rmar_1443 (Rmar_1443)
Accession : YP_003290718.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1683023 - 1684474 bp
Length : 1452 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dal:Dalk_5100 glutamine synthetase, type I

DNA sequence : 
ATGGCGCCGCCACTGATCACGGAAATGCCGGTGGAAACCCGGCAGGAAGCCATCCGGAAGGTGTTCGAGCTGATCGAAAA
GGAAGGGGCGCAGATGGTCGACATTCGCTTTGTCGACTTTCTGGGCCAGCAGCAGCACTTTTCGATCCCGGCCGATCAGT
TCGAGCCCGATCACTTCGATGAGGGCGTGGGCTTCGACGGCTCGTCGATCCGGGGCTGGAAGAGCATTCACGAGTCGGAC
ATGCTGGTGATCCCGGATCCGACGACCGCCTTCATCGATCCGTTCTTCCAGCACAAGACGGTTGTGCTCATCGGCGAAAT
CCACGAGCCCGGCACGCTGGAGCCCTTTCAGCGCTGCCCGCGGGGCATCGCCCGTCGCGCCGAGCAGTTCCTGAAGCAGT
CGGGCATCGCCGACGTAGCCTACTTCGGGCCGGAGGCCGAGTTCTTCGTCTTCGATCACGCCTCGTTCGACGAAGGCCCC
AACCATGCCTTCTACAAGATCGACTCGGACGAAGGCGCCTGGAACCGGGGCCGGCACGACAGCCTGGGCTACAAGCCCAC
CACGAAGGGGGGCTACTTCCCCGTGCCGCCGACCGACTCGCTGCAGAACCTGCGCGCCGAGATGGTGCTCCACATGGAGG
CCATCGGTATTCCGGTCGAGTGCCAGCACCACGAGGTGGCCTCCGGCGGCCAGTGCGAGATCGACTTCCGCTTCCAGCCG
CTGCTGAAGTGCGCCGATTTCCTGATGAATTACAAGTACATCGTCAAGAACACGGCCTGGAAGTACGGCAAGACGGTCAC
CTTCATGCCCAAGCCGATCTTTGGCGACAACGGCTCGGGCATGCACACGCACATCTCGCTCTGGAAGGATGAGCAGCCGC
TGTTCTTCGGCGACAGATACGCCGGGCTGAGCCAGGAGGCGCTCTGGTTCATCGGCGGCATCCTGCACCACGCACCGGCC
GTCATCGCCTTCACGAACCCGACGACGAACTCCTTCCGGCGGCTGGTGCCGGGCTTCGAGGCGCCGGTGAACCTGGTCTA
TTCGGCCCGGAACCGCAGCGCCGCCATCCGCATCCCGGTCTACTCGGACAGCCCCAAGGCCAAGCGGATCGAAGCCCGCT
TCCCGGACCCGTCCTGCAATCCGTACCTGGCCTTCTCGGCGCTGTTGCTGGCCGGGCTCGACGGCATCCGCAATCAGATC
GATCCGGGTCAGCCGGTCGACCGGGACATCTACCACCTGTCGCCGGAAGAACAGGCCGCGCTGCCCCAGGCGCCCAAGTC
GCTCGAAGAGGCGCTCGAGGCGCTCGAAAAGGACCACGAATTCCTGCTGCAGGGCGGCGTCTTCACCGAGGACGTGATCG
AGGCCTGGATCCAGTACAAGTACGACAACGAGGTGCAGCAACTCCGGATGCGCCCGCATCCGTACGAGTTCTCGCTGTAC
TTCGACGTGTAA

Protein sequence : 
MAPPLITEMPVETRQEAIRKVFELIEKEGAQMVDIRFVDFLGQQQHFSIPADQFEPDHFDEGVGFDGSSIRGWKSIHESD
MLVIPDPTTAFIDPFFQHKTVVLIGEIHEPGTLEPFQRCPRGIARRAEQFLKQSGIADVAYFGPEAEFFVFDHASFDEGP
NHAFYKIDSDEGAWNRGRHDSLGYKPTTKGGYFPVPPTDSLQNLRAEMVLHMEAIGIPVECQHHEVASGGQCEIDFRFQP
LLKCADFLMNYKYIVKNTAWKYGKTVTFMPKPIFGDNGSGMHTHISLWKDEQPLFFGDRYAGLSQEALWFIGGILHHAPA
VIAFTNPTTNSFRRLVPGFEAPVNLVYSARNRSAAIRIPVYSDSPKAKRIEARFPDPSCNPYLAFSALLLAGLDGIRNQI
DPGQPVDRDIYHLSPEEQAALPQAPKSLEEALEALEKDHEFLLQGGVFTEDVIEAWIQYKYDNEVQQLRMRPHPYEFSLY
FDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-96 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmar_1443 YP_003290718.1 glutamine synthetase, type I VFG1399 Protein 6e-127 58