Gene Information

Name : VEA_002517 (VEA_002517)
Accession : YP_003285144.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 999292 - 1001853 bp
Length : 2562 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGCTGAACAAAAACACACTCCGATGATGCAGCAATACCTCAAGCTAAAAGCTGAGAACCCTGAGATTTTGCTGTT
CTACCGCATGGGCGATTTCTACGAACTCTTTTACGATGATGCAAAGCGAGCATCCCAACTGCTTGATATTTCGCTAACTA
AGCGCGGTTCGTCAGCTGGAGAGCCTATTCCTATGGCGGGAGTGCCATTTCACGCAGTAGAAGGCTATCTAGCAAAACTT
GTTCAGCTTGGTGAATCAGTCGCAATCTGTGAACAAATTGGCGATCCAGCCACCAGCAAAGGTCCGGTAGAACGTAAAGT
TGTGCGTATCGTGACACCAGGCACTGTTACTGATGAAGCATTGCTTTCTGAGCGTGTCGATAACTTAATCGCAGCCATTT
ACCATCACAACGGTAAGTTCGGTTATGCTACGCTGGATGTCACTTCTGGTCGCTTCCAACTGACAGAACCAGAAACCGAA
GAAGCGATGACAGCCGAGCTTCAGCGTACCGCACCACGTGAGCTACTATTCCCAGAAGACTTTGAACCTGTACATTTAAT
GGCGAGCCGCAACGGTAACCGTCGTCGCCCAGTATGGGAATTTGAGCTTGATACGGCTAAGCAACAACTCAATCAACAGT
TTGGCACCAAAGATCTGGTTGGTTTTGGCGTAGAACATGCGTCCTTAGGGTTATGTGCTGCTGGTTGTTTGATCCAGTAT
GTGAAAGATACGCAACGCACGGCTTTACCTCATATTCGCTCTTTAACGTTTGATCATCAGGACCAATCCGTCATCCTTGA
TGCCGCTACCCGACGCAACCTGGAAATTACTCAAAATCTAGCAGGCGGAACCGATAACACGCTCGCTGCGGTACTCGACC
ATTGTGCGACGCCGATGGGCAGCCGAATGCTGAAGCGTTGGTTGCATCAACCTATGCGTTGCATTGAAACGTTAAACAAT
CGTCTTGATGCGATTGGTGAGATTAAAGAACAAGCGCTGTTTGCCGATCTTCAACCAACGTTAAAACAAATTGGTGATAT
TGAACGTATCTTAGCACGCCTTGCACTGCGCTCTGCTCGCCCTCGCGATATGGCTAGACTTCGCAATGCCATGCAGCAGC
TACCAGAGCTAGAATCTGTAACCGCTTCTTTGACCCATCCATATCTAGCAAAACTGGCGCAATACGCAGCTCCGATTGAC
GAAGTATGTGATCTGTTAGAGCGTGCGATTAAAGAAAATCCGCCGGTTGTTATTCGTGATGGTGGTGTGATCGCTGAAGG
CTATAATGCCGAGCTCGATGAATGGCGCAAATTAGCAGACGGTGCAACAGAATACCTTGAGCAGCTTGAGCGAGATGAGC
GTGAACGACACGGCATCGATACGCTTAAAGTCGGCTACAACAACGTACATGGCTTCTTTATTCAAGTGAGCCGTGGCCAG
AGCCATTTGGTTCCACCGCACTATGTGCGTCGCCAAACACTCAAAAATGCCGAACGCTATATCATCCCAGAGCTCAAAGA
GCACGAAGACAAAGTACTTAATTCGAAATCGAAAGCGCTGGCACTTGAAAAGCAGCTGTGGGAAGAACTGTTTGATCTAT
TGATGCCAAACTTGGAGAAGTTGCAGAATTTAGCTTCTGCTCTGTCTCAACTGGATGTACTACAAAACCTAGCAGAACGT
GCAGATTCCTTGGATTACTGCCGACCAACGCTTGTGAAAGACGCTGGCATTCACATTCAAGCGGGTCGTCACCCAGTCGT
AGAGCAAGTAACAACAGAACCGTTCATTGCTAACCCAATAGAGCTTAACCCAGCTCGTAAGATGTTGATCATCACCGGTC
CAAACATGGGTGGTAAATCCACCTACATGCGTCAAACTGCGCTGATTGCATTGATGGCACATATCGGCTCTTATGTACCT
GCAGAATCTGCACAAATTGGTTCTTTAGATCGTATATTTACTCGTATTGGTGCGTCAGATGATCTTGCATCTGGTCGTTC
GACCTTCATGGTAGAAATGACGGAAACCGCTAATATTCTGCACAATGCGACTAAAAACAGTTTAGTGCTAATGGATGAAA
TCGGTCGTGGTACCAGTACTTACGATGGCCTCTCTTTAGCTTGGGCAAGTGCGGAATGGCTCGCAACACAAATTGGTGCG
ATGACACTATTTGCAACTCACTACTTCGAATTGACAGAGTTGCCAAACCAACTGCCAAACTTAGCGAACGTTCACTTGGA
TGCGGTAGAGCATGGAGACAGCATTGCCTTTATGCACGCAGTTCAAGAAGGTGCGGCAAGTAAGTCTTACGGCCTAGCTG
TTGCGGGCTTAGCCGGCGTACCCAAAACGGTCATCAAAAATGCGCGTAACAAGCTATCTCAGCTAGAGCAACTAGGGCAA
AACAGTGACGCACCACGTCCAAGTGCAGTAGATGTGGCTAACCAATTGAGTCTAATTCCAGAACCTAGCGAGATCGAACA
AGCCTTATCTGGTATTGATCCTGATGATTTGACTCCACGCCAAGCACTTGAAGAGTTGTATCGTTTGAAGAAGATGCTTT
AA

Protein sequence :
MKAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGSSAGEPIPMAGVPFHAVEGYLAKL
VQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYHHNGKFGYATLDVTSGRFQLTEPETE
EAMTAELQRTAPRELLFPEDFEPVHLMASRNGNRRRPVWEFELDTAKQQLNQQFGTKDLVGFGVEHASLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDHQDQSVILDAATRRNLEITQNLAGGTDNTLAAVLDHCATPMGSRMLKRWLHQPMRCIETLNN
RLDAIGEIKEQALFADLQPTLKQIGDIERILARLALRSARPRDMARLRNAMQQLPELESVTASLTHPYLAKLAQYAAPID
EVCDLLERAIKENPPVVIRDGGVIAEGYNAELDEWRKLADGATEYLEQLERDERERHGIDTLKVGYNNVHGFFIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEELFDLLMPNLEKLQNLASALSQLDVLQNLAER
ADSLDYCRPTLVKDAGIHIQAGRHPVVEQVTTEPFIANPIELNPARKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVP
AESAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA
MTLFATHYFELTELPNQLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARNKLSQLEQLGQ
NSDAPRPSAVDVANQLSLIPEPSEIEQALSGIDPDDLTPRQALEELYRLKKML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_002517 YP_003285144.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 71