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Name : VEA_002189 (VEA_002189) Accession : YP_003284817.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 618177 - 620312 bp Length : 2136 bp Strand : + Note : - DNA sequence : ATGAATATTTTCGCTATCTTGAACCACATGGGTGTGTTCTTTAAAGAAGAGCCAGTTCGTCAACTTCACGCTGCTCTTGA GAAAGCGGGCTACGAAGTGGTTTACCCAGTAGATGATAAAGACTTGATCAAAATGATTGAGATGAACCCACGCATTTGCG GTGTGCTGTTCGACTGGGATAAATACTCACTAGAGCTATGTGAACGTATTAGCCAAATCAACGAAAAACTGCCTGTTCAC GCATTTGCTAACGAACAGTCTACTCTAGACATTTCACTAACAGACCTACGTCTAAACGTGAGCTTCTTCGAGTACGCTTT AGGTATGGCTGACGACATCGCTATCAAAATCAACCAAGCGACTGAGGCATACAAAGATGCCATCATGCCTCCATTCACTA AAGCGTTATTCAAATACGTAGAAGAAGGTAAATACACCTTCTGTACTCCAGGTCACATGGGCGGTACTGCATTCCAGAAA AGCCCTGCTGGTAGCATCTTCTACGATTTTTACGGTCCAAACACATTTAAAGCGGACGTATCAATCTCAATGCCTGAGCT AGGTTCTCTACTAGACCACTCAGGTCCACATAAAGATGCAGAAGAATACATCGCACGCACATTCAATGCAGACAGCTCGT ACATCGTAACGAACGGTACGTCTACATCGAACAAAATTGTTGGCATGTACTCAGCACCTGCGGGCAGCACAGTACTGATT GACCGTAACTGTCACAAATCTCTGACTCACCTAATGATGATGAGCGACGTGACACCAATCTACTTCCGCCCAACTCGTAA CGCATACGGCATCCTTGGTGGTATTCCACAAAGCGAATTCAGCCGAGATGTCATTGCAGAGAAAGTGGCGAAAACACCAG GTGCAACAGCGCCAAGTTACGCAGTAGTGACTAACTCAACTTACGATGGCTTGTTGTACAACACACAATTCATCAAAGAG TCGCTAGACTGTAAACACATCCACTTCGACAGTGCTTGGGTGCCTTACACTAACTTCAACCCAATTTACGAAGGTAAATG TGGTATGAGTGGTGAAGCGATGCCAGGCAAAGTGTTCTACGAAACACAATCAACACACAAACTGTTGGCAGCGTTCTCAC AAGCTTCAATGATTCACGTGAAAGGTGACTTTGATAAAGAGTCTTTCAACGAAGCATTCATGATGCACACTTCAACTTCA CCTCAGTACGGCATTGTGGCTTCTACTGAAACTGCAGCGGCAATGATGCGCGGCAACACTGGTAAGAAGTTGATGCAAGA CTCTATCGATCGCGCAATCCGCTTCCGTAAAGAGATCAAACGCCTAGAAGCAGAAAGTGACAGCTGGTTCTTCGATGTAT GGCAACCAGAAAACATCGATACCACGGAATGTTGGAAACTAGACCCTAGCGACACATGGCACGGCTTCAAGAACATGGAT GACAACCACATGTATCTTGATCCAATCAAAGTAACGCTACTAACTCCGGGGATGAATAAAGAAGGCGAACTAGAAGAATC AGGTATTCCTGCTTCGCTGGTGGCTAAATTCCTAGACGAGCGCGGCATCGTGGTAGAGAAAACAGGTCCATACAACTTGT TGTTCCTATTCTCAATCGGTATCGACAAATCAAAAGCAATGCAATTGCTACGCGGTCTGACTGAATTTAAACGTGGGTAC GACTTGAACCTAACCATCAAGAGCTTCCTACCTTCGCTATATAATGAAGACCCAAGCTTCTATGAAGGCATGCGCGTTCA AGAATTAGCACAAGCGATTCACAACCTAACTAAGAAATACAATCTACCAGAGCTAATGTACAAAGCGTTCGATGTTCTTC CTGAAATGAAAGTAACACCACACGCAGCATGGCAAGAAGAGCTTCGCGGTAACGTAGAAGAAATCAAACTGGAAGAAATG GTTGGTCGCGTAAGTGCGAACATGATCCTTCCTTACCCTCCAGGCGTGCCACTAGTACTTCCTGGTGAAATGGTGACTCA AGAGTCTCGCCCTGTGCTGGACTTCCTAGAGATGCTTTGTGAGATCGGTGCGCATTACCCAGGTTTCGAAACCGACATCC ACGGTCTGTACCAACAAAAAGATGGTAGCTACACTGTAAAAGTATTGAAGAACTAA Protein sequence : MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWDKYSLELCERISQINEKLPVH AFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQATEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQK SPAGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSYAVVTNSTYDGLLYNTQFIKE SLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTS PQYGIVASTETAAAMMRGNTGKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRGLTEFKRGY DLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHNLTKKYNLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEM VGRVSANMILPYPPGVPLVLPGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_002189 | YP_003284817.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
