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Name : VEA_001892 (VEA_001892) Accession : YP_003284520.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : general secretion pathway protein D/type II secretion outermembrane pore forming protein (PulD) Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 280841 - 282859 bp Length : 2019 bp Strand : - Note : - DNA sequence : GTGAAACATTGGTTCAGCAAAAGTGCTTGGCTACTAGCAGGAAGTTTACTCTGCGTCCCAGGTGCAATAGCAAACGAATT TAGTGCCAGCTTTAAAGGCACTGATATTCAAGAATTCATCAACATAGTGGGTCGTAATCTCGAAAAGACCATCATTGTTG ACCCTTCAGTGCGCGGTAAAATCGATGTCCGCAGCTATGACGTGCTTAACGAAGAGCAATACTATAGCTTTTTCCTTAAC GTACTCGAAGTATACGGCTACGCCGTCGTAGAAATGGACAACGGTGTACTTAAGGTTATCAAAGCGAAAGACTCAAAAAC GTCAGCAATCCCTGTATTAGGTGATGGCAGCGCGCAAGGCGACAGCGTTATCACTCGAGTTGTTGCGGTGCGTAATGTTT CGGTTCGTGAGTTGTCTCCTCTACTTCGTCAACTGATTGATAATGCTGGTGCTGGTAACGTAGTTCACTACGATCCAGCG AACATCATCTTAATCACAGGTCGTGCGGCGGTCGTAAATCGCTTAGCAGAAATCATTAAGCGTGTTGACCAAGCGGGTGA TAAAGAAATTGAGCTGGTGGAACTGCGCAATGCTTCTGCTGCCGAAATGGTGCGTATTGTTGAAGCACTGAATAAAAGCA CCAATCAGAAGAGCACGCCTGAGTTCCTTGAGCCTAAAATTGTTGCCGATGAACGCACCAACGCGATTTTGATTTCTGGC GATCCTAAAGTACGTGCGCGTCTGAAGCGATTGATTCGTCAACTTGACGTTGAAATGGCGACCAAAGGTAACAACCGTGT GGTTTACCTGAAGAACGCGAAAGCTGAAGATTTGGTGGATGTACTAAAAGGTGTCTCCGATAACCTACAAGCTGAAAAGC AAGTCGGCCAGAAAGCGTCAGGTGCCCAGCGTGGTGAAGTGGTGATTGCTGCGCACGCAGCGACCAATGCCTTAGTATTA ACGGCTCCACCAGATATCATGAATGCGCTACAAGATGTTATTGCTCAGCTTGATATTCGTCGTGCTCAAGTCTTGATTGA GGCGCTGATCGTTGAAATGTCAGAAGGTGACGGCATTAACTTAGGTGTTCAGTGGGGCTCACTGGAAACCGGTGCGGTGA TTCAGTACGGTAACTCTGGTGCACCGATTGGTCAGGTAATGGTTGGTCTAGAAGAAGCAAAAGATCAAACTCGAACTGAA TACTACACAAATGCGAATGGCGAACGAACGCCATATGATGTTACTGAATCTGGTGACTATTCTACTCTTGCATCGGCACT GAGCGGTGTTAACGGTGCTGCGATGAGCATCGTGATGGGTGACTGGACTGCTTTGGTCAGCGCGGTAGCGACCGACTCCA ACTCAAACATTCTATCTTCTCCAAGTATCACGGTAATGGATAATGGTGAAGCATCATTTATTGTTGGTGAAGAAGTGCCT GTTATCACAGGCTCTACGGCTGGCTCAAACAACGACAATCCATTCCAAACGGTTGATCGTAAAGAAGTTGGTATCAAGCT TAAGGTTGTGCCACAAATTAACGAAGGTGACTCTGTTCAGTTAAATATCGAGCAAGAAGTGTCCAATGTGTTGGGGGCTA ACGGTGCGGTTGACGTTCGCTTTGCTAAGCGTCAGCTAAACACCTCAGTCATGATCCAAGATGGTCAGATGCTGGTTCTT GGTGGCTTGGTTGATGAACGTGCACTCGAAAGTGAGTCAAAAGTACCGCTACTGGGTGACATCCCAGTGCTTGGTCATTT GTTCAAATCAACCAGCACGCAAACAGAAAAGCGTAACTTGATGGTGTTCATCAAGCCGACGATTATTCGTGATGGTATGA CCGCAGACGGCATTACACAGCGCAAATACAACTTTATTCGCGCAGAGCAGCTCTACAAAGCGGATCAAGGATTGAAGTTG ATGGCTGACGAGAAGATCCCAGTCATGCCGGCCTTTGGTCAGGAGCGTCAGCACCCAACCGAGATCCAAGCGTTTATTGA TCAGATGGAAAATAACTAA Protein sequence : MKHWFSKSAWLLAGSLLCVPGAIANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLN VLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDGSAQGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPA NIILITGRAAVVNRLAEIIKRVDQAGDKEIELVELRNASAAEMVRIVEALNKSTNQKSTPEFLEPKIVADERTNAILISG DPKVRARLKRLIRQLDVEMATKGNNRVVYLKNAKAEDLVDVLKGVSDNLQAEKQVGQKASGAQRGEVVIAAHAATNALVL TAPPDIMNALQDVIAQLDIRRAQVLIEALIVEMSEGDGINLGVQWGSLETGAVIQYGNSGAPIGQVMVGLEEAKDQTRTE YYTNANGERTPYDVTESGDYSTLASALSGVNGAAMSIVMGDWTALVSAVATDSNSNILSSPSITVMDNGEASFIVGEEVP VITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTSVMIQDGQMLVL GGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTEKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKADQGLKL MADEKIPVMPAFGQERQHPTEIQAFIDQMENN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-176 | 56 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-168 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_001892 | YP_003284520.1 | general secretion pathway protein D/type II secretion outermembrane pore forming protein (PulD) | VFG2047 | Protein | 9e-165 | 55 |
