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Name : VEA_001891 (VEA_001891) Accession : YP_003284519.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 279339 - 280841 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGGTTGATATGTTAGACACAGCGCCAAGTATGCGTCGTCTGCCATTCAGTTTTGCCAATCGCTTTAAACTGGTGCTGGA GACAGAGCATCCTGAGCGTCCGCCCATTCTTTACTATGTCGAGCCGCTCAACCCAGCGGCTCTGGTCGAAGTCCGTCGTG TGCTGAAGAAAAGCTTCGTACCGCAGCCTATCGATAAAGAAGCCTTTGATAAAAAGCTGACCGAAGCATATCAACGTGAC TCGTCTGAAGCGCGTCAATTGATGGAAGACATCGGTGCCGATAGCGACGACTTTTTCTCATTGGCTGAAGAGCTGCCGCA TGATGAAGACTTGCTAGAGTCAGAAGACGATGCACCAATCATTAAGTTGATCAATGCGATGTTGGGTGAAGCAATTAAAG AAGGGGCGTCGGATATTCATATCGAAACTTTCGAGAAAACCCTTTCGATTCGTTTCCGTGTCGATGGCGTATTGCGTGAA GTGCTCACTCCAAGTCGTAAGCTTGCACCACTGTTAGTGTCGCGAGTGAAGGTCATGGCGAAGCTGGATATTGCAGAAAA GCGTGTACCTCAAGATGGTCGTATCTCGTTGCGTATTGGTGGTCGTGCGGTTGATGTGCGTGTTTCTACAATGCCGTCGT CACATGGTGAGCGAGTAGTTATGCGTCTGTTGGATAAAAACGCGACGCGTCTCGATTTGCATAGCTTAGGTATGACGCCG TCCGTACACGACAATTTCCGTCATCTTATTCAGCGTCCTCACGGTATCATCTTGGTCACCGGCCCGACGGGTTCTGGTAA GTCGACGACTTTGTACGCTGGCTTGCAAGAGATCAACAGTAACGAACGCAATATCTTAACGGTTGAAGACCCGATCGAAT TTGATATTGATGGCATCGGTCAGACTCAGGTGAACCCGAAGGTCGACATGACTTTTGCGCGTGGCTTGCGTGCTATTCTG CGTCAGGACCCTGACGTGGTGATGGTCGGTGAGATCCGTGACTTAGAAACCGCACAAATTGCAGTGCAAGCGTCCTTAAC GGGTCACTTAGTAATGTCGACCCTTCACACCAACACCGCTGTTGGTGCGATCACGCGTCTACGCGATATGGGCATTGAAC CATTCCTTATTTCTTCATCGTTATTGGGTGTGTTAGCACAGCGCTTGGTTCGTACGCTTTGCCCAAGTTGTAAAGAACCG TATGAAGCCGATGCTGAACAGAAGAAACTGTTTGGTATGGAAGCACATGAACCACTAGAGCTACACCGTGCTAAAGGCTG TGAAGCGTGTAACCAAAAAGGCTACCGAGGTCGAACAGGTATCCACGAGCTCATTATGGTCGATGAGCAAGTGCAAGAAT TGATTCACCGAGAGTCTGGTGAGCAAGAAATTGAGAGAGCTGTTCGCGCTCATACGCCAAGTATTCGCAGTGATGGTCTA AGCAAAGTACGTCGTGGTATTACGTCACTTGAAGAAGTGATGCGAGTGACGAAGGAAACCTAA Protein sequence : MVDMLDTAPSMRRLPFSFANRFKLVLETEHPERPPILYYVEPLNPAALVEVRRVLKKSFVPQPIDKEAFDKKLTEAYQRD SSEARQLMEDIGADSDDFFSLAEELPHDEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLRE VLTPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTP SVHDNFRHLIQRPHGIILVTGPTGSGKSTTLYAGLQEINSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAIL RQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCPSCKEP YEADAEQKKLFGMEAHEPLELHRAKGCEACNQKGYRGRTGIHELIMVDEQVQELIHRESGEQEIERAVRAHTPSIRSDGL SKVRRGITSLEEVMRVTKET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-164 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-164 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-163 | 66 |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG0182 | Protein | 5e-147 | 64 |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-132 | 58 |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG0233 | Protein | 6e-84 | 47 |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-78 | 46 |
| VEA_001891 | YP_003284519.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-87 | 46 |
