Gene Information

Name : VEA_004301 (VEA_004301)
Accession : YP_003286924.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2985576 - 2986823 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAAGTAACTACACGGCTTACCGATAAAGAAATCAAATCAGCAAAACCAAGCGACAAAGAATACAACCTCTTTGA
TGGAGACGGGCTTCGTCTACGCATCAAACCTAACAGCTCAAAACATTGGATATTTAACTACTACAGACCAATGAACCGTA
AACGAGCAAACCTCAGTCTAGGTAAATATCCTGACCTATCATTAGCTAATGCTCGCAAAATAGCCCTTGAAGCCAGCGAA
CTGCTTGCACAAGGAATTGACCCTCAGGATGAAAAGAAGCGTAAGCAGGATGAGCACAACGCAATCCACCAGCATACTTT
CCTCAATGTTTCTAAAGAATGGTTCGAACTGAAAAAGGATGAGGTTACACCTGATTACGCTGTTGATATTTGGCGCTCAT
TAGAACTACATATTCTTCCTTCAATATCTAACCTTCCTATTAGCTCAATTAATGCCCCTCAAATTATCGAGTTACTCAAG
CCTATCGAAGCTAAGGGAAGCCTAGAAACTGTTAAACGTTTATCTCAACGCCTAAATGAGATCATGAACTTTGCTACTAA
CTGTGGCCTAGTACCTGCTAATCCCCTTACTGGTATCCGAGCAGCATTCAAGAAGCCCAAAAAAGAGAATATGGCAGCAC
TAAAGCCAGCAGAACTACCTGAACTAATGGGGGCAATTGCAAACGCAAGCATCAAGCGCACCACACGCTGTTTAATTGAA
TGGCAACTTCATACCATGACTCGACCTAGCGAGGCATCTGGTGCACGTTGGGATGAAATAAACTGGGATGAAAAGATATG
GACTATTCCAGCAGAACGTATGAAGAAACGCCGAGAACACCGTATTCCATTAACAGAGCAAATGCTTGAGCTTTTAGAAG
TAATCAAACCAATTAGCGGTCATCGAGAGTTTATATTTCCTTCAGACCGCGATCCTAAAAAACCATGTAATAGCCAAACA
GCCAATATGGCACTTAAACGTATGGGATTTGCAGGCAGATTGGTTAGCCATGGTCTTCGCTCGCTGGCGAGTACTACGCT
GAACGAGCAAGGCTTTGATAGGGATTTAATTGAAGCAGCTCTGGCTCACGTTGATGATAATCAAGTACGTAGTGCTTACA
ACCGAACTGACTACCTAGAACGTCGACGTCCAATGATGTGCTGGTGGAGTGGAAATATAGAAGAAGCCGCTAAAGGCAAC
CTTTCGGTTACAGGAACTAAGCAATTAAAAGTTATGAGTGGTAACTAA

Protein sequence : 
MAKVTTRLTDKEIKSAKPSDKEYNLFDGDGLRLRIKPNSSKHWIFNYYRPMNRKRANLSLGKYPDLSLANARKIALEASE
LLAQGIDPQDEKKRKQDEHNAIHQHTFLNVSKEWFELKKDEVTPDYAVDIWRSLELHILPSISNLPISSINAPQIIELLK
PIEAKGSLETVKRLSQRLNEIMNFATNCGLVPANPLTGIRAAFKKPKKENMAALKPAELPELMGAIANASIKRTTRCLIE
WQLHTMTRPSEASGARWDEINWDEKIWTIPAERMKKRREHRIPLTEQMLELLEVIKPISGHREFIFPSDRDPKKPCNSQT
ANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEAALAHVDDNQVRSAYNRTDYLERRRPMMCWWSGNIEEAAKGN
LSVTGTKQLKVMSGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-166 83
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-166 83
int AAK20773.1 integrase Not tested VPI Protein 1e-166 83
int AAK20803.1 integrase Not tested VPI Protein 1e-166 83
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-166 83
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-104 55
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-100 54
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-100 54
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 4e-100 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_004301 YP_003286924.1 phage integrase VFG1092 Protein 2e-100 54